record GenBank ID history name product exons length notes frameshift 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 pf10 1 pf10:28491w|pf10_0001 pf10_1:28491w pf10_0001 chr10_1.glm_16+chrblob_4210|01jun01 vbc pfemp1 var pfemp1 var 2 6726 28491 33893 34843 36165 pf10 2 pf10:38051c|pf10_0002 pf10_1:38051c pf10_0002 chr10_1.glm_17|01jun01 glm rifin rifin 2 1116 38051 39112 39343 39396 pf10 3 pf10:41774c|pf10_0003 pf10_1:41774c pf10_0003 chr10_1.glm_18|01jun01 glm stevor stevor 2 1038 41774 42739 42893 42964 pf10 4 pf10:44817c|pf10_0004c pf10_1:44817c pf10_0004c chr10_1.glm_19|01jun01 glm rifin rifin 2 1116 44817 45878 46081 46134 pf10 5 pf10:48053c|pf10_0005 pf10_1:48053c pf10_0005 chr10_1.glm_20|01jun01 vbc rifin rifin 2 1110 48053 49108 49332 49385 pf10 6 pf10:51350.1c|pf10_0006 pf10_1:51350.1c pf10_0006 chr10_1.glm_21|01jun01|alt1 vbc rifin rifin 2 1071 last codon = tta not ttg 51350 52366 52547 52600 pf10 7 pf10:51350.2c|pf10_0006 pf10_1:51350.2c pf10_0006 chr10_1.glm_21|01jun01|alt2 glm stevor stevor 2 1086 51350 52366 52532 52600 pf10 8 pf10:54543c|pf10_0007 pf10_1:54543c pf10_0007 chr10_1.glm_22+23|01jun01 vbc stevor pseudogene stevor pseudogene 2 806 55132c [A] | 54801 [A] 54543 55279 55389 55457 pf10 9 pf10:57948w|pf10_0009+olim_pf10_0010 pf10_1:57948w pf10_0009+olim_pf10_0010 chr10_1.glm_24|01jun01 vbc stevor pseudogene stevor pseudogene 2 900 compare gene chr 10 469 taa @ 58262 57948 58016 58151 58981 pf10 10 pf10:60022w|pf10_0011+pf10_0012w pf10_1:60022w pf10_0011+pf10_0012w chr10_1.glm_25|01jun01 vbc var-c pseudogene var-c pseudogene 1 1345 aligns with c1:602412w pfa0755w var-c pseudogene aligns with central region c2:873767c pfb0975c var-c pseudogene fragment 60091w [A] | 60221 [TA] | 61261 [T] 60022 61366 pf10 11 pf10:63153w|pf10_0013 pf10_1:63153w pf10_0013 chr10_1.glm_26|01jun01 glm stevor stevor 2 696 63153 63224 63410 64033 pf10 12 pf10:67808c|pf10_0014+pf10_0015 pf10_1:67808c pf10_0014+pf10_0015 chr10_1.glm_27|01jun01 vbc 2 933 67808 68515 68738 68962 pf10 13 pf10:70548c|pf10_0016 pf10_1:70548c pf10_0016 chr10_1.glm_28|01jun01 glm 1 273 70548 70820 pf10 14 pf10:72935c|pf10_0017 pf10_1:72935c pf10_0017 chr10_1.glm_29|01jun01 glm 2 837 72935 73570 73718 73918 pf10 15 pf10:74662c|pf10_0018 pf10_1:74662c pf10_0018 chr10_1.glm_30|01jun01 glm 2 2766 74662 77340 77487 77573 pf10 16 pf10:81417c|pf10_0019 pf10_1:81417c pf10_0019 chr10_1.glm_31|01jun01 glm qimr:ts etramp etramp 1 324 81417 81740 pf10 17 pf10:86539c|pf10_0020 pf10_1:86539c pf10_0020 chr10_1.glm_32|01jun01 glm 2 2292 86539 88635 88816 89010 pf10 18 pf10:92574c|pf10_0021 pf10_1:92574c pf10_0021 chr10_1.glm_33|01jun01 vbc 2 843 92574 93317 93471 93569 pf10 19 pf10:96114c|pf10_0022 pf10_1:96114c pf10_0022 chr10_1.glm_34|01jun01 vbc 2 783 96114 96797 96934 97032 pf10 20 pf10:99380c|pf10_0023chr10_1.glm_35|01jun0 pf10_1:99380c pf10_0023chr10_1.glm_35|01jun01 vbc 2 831 99380 100003 100156 100362 pf10 21 pf10:103119c|pf10_0024 pf10_1:103119c pf10_0024 chr10_1.glm_36|01jun01 vbc 2 1326 103119 104243 104400 104600 pf10 22 pf10:106654c|pf10_0025 pf10_1:106654c pf10_0025 chr10_1.glm_37|01jun01 glm 2 1896 106654 108432 108547 108663 pf10 23 pf10:112930w|pf10_0026 pf10_1:112930w pf10_0026 chr10_1.glm_38+39+b3280|01jun01 vbc 2 2940 112930 113118 113266 116016 pf10 24 pf10:117243w|pf10_0027 pf10_1:117243w pf10_0027 chr10_1.glm_40|01jun01 glm 1 1293 117243 118535 pf10 25 pf10:121116w|pf10_0028 pf10_1:121116w pf10_0028 pf10_0028w|03oct02 vbc 6 726 121116 121170 121427 121544 121657 121745 122255 122332 122501 122588 122701 122998 pf10 26 pf10:123771c|pf10_0029c pf10_1:123771c pf10_0029c chr10_1.glm_42+43|01jun01 vbc 3 564 downstream ag splice 123771 123819 124065 124154 124459 124883 pf10 27 pf10:125940w|pf10_0030 pf10_1:125940w pf10_0030 chr10_1.glm_44|01jun01 glm 1 1662 125940 127601 pf10 28 pf10:129277w|pf10_0031 pf10_1:129277w pf10_0031 chr10_1.glm_45.1|01jun01 vbc 1 2835 129277 132111 pf10 29 pf10:132996w|pf10_0032 pf10_1:132996w pf10_0032 chr10_1.glm_45.2+chrb3129|01jun01 vbc 1 4278 132996 137273 pf10 30 pf10:138766w|pf10_0033 pf10_1:138766w pf10_0033 chr10_1.glm_46|01jun01 vbc 4 327 138766 138890 139134 139214 139406 139436 139579 139668 pf10 31 pf10:142420w|pf10_0034 pf10_1:142420w pf10_0034 chr10_1.glm_48|01jun01 glm 1 3819 142420 146238 pf10 32 pf10:147640w|bis pf10_1:147640w bis pf10_0034|03oct02 tigr/vbc /vbc 4 285 147640 147648 147740 147793 147896 148054 148178 148240 pf10 33 pf10:149343w|pf10_0035 pf10_1:149343w pf10_0035 chr10_1.glm_50|01jun01 vbc 2 600 149343 149738 149836 150039 pf10 34 pf10:150417c|pf10_0036 pf10_1:150417c pf10_0036 chr10_1.glm_51|01jun01 glm 1 459 150417 150875 pf10 35 pf10:152365c|pf10_0037 pf10_1:152365c pf10_0037 chr10_1.glm_52|01jun01 glm 1 6153 152365 158517 pf10 36 pf10:160316c|pf10_0038 pf10_1:160316c pf10_0038 chr10_1.glm_53+54|01jun01 vbc 2 357 160316 160572 160863 160962 pf10 37 pf10:164945w|pf10_0039 pf10_1:164945w pf10_0039 chr10_1.glm_55|01jun01 glm 1 846 164945 165790 pf10 38 pf10:166743c|pf10_0040 pf10_1:166743c pf10_0040 chr10_1.glm_56|01jun01 glm 1 3927 166743 170669 pf10 39 pf10:172723c|pf10_0041 pf10_1:172723c pf10_0041 chr10_1.glm_57|01jun01 glm 1 3708 172723 176430 pf10 40 pf10:177921w|pf10_0042 pf10_1:177921w pf10_0042 chr10_1.glm_58|01jun01 vbc 2 765 177921 178321 178507 178870 pf10 41 pf10:179344c|pf10_0043 pf10_1:179344c pf10_0043 chr10_1.glm_59|01jun01 vbc 2 609 179344 179940 180215 180226 pf10 42 pf10:182244.1w|pf10_0044 pf10_1:182244.1w pf10_0044 chr10_1.glm_60+61|01jun01|alt1 vbc 10 3573 nested gene = alt2 182244 182289 182385 182552 182791 183027 183149 183530 183738 184041 184174 184309 184396 184641 184786 186639 186784 186855 186973 187100 pf10 43 pf10:187101.2w|pf10_0044|01jun01|alt2 pf10_1:183535.2w pf10_0044|01jun01|alt2 vbc 1 2 nested gene = alt2 187101 187100 pf10 44 pf10:187669c|pf10_0045 pf10_1:187669c pf10_0045 chr10_1.glm_62|01jun01 glm 2 9042 187669 194372 194617 196954 pf10 45 pf10:199452c|pf10_0046 pf10_1:199452c pf10_0046 chr10_1.glm_63|01jun01 vbc 1 3393 199452 202844 pf10 46 pf10:207000c|pf10_0047 pf10_1:207000c pf10_0047 chr10_1.glm_64|01jun01 glm 1 2643 207000 209642 pf10 47 pf10:213986c|pf10_0048 pf10_1:213986c pf10_0048 chr10_1.glm_65|01jun01 glm 1 609 213986 214594 pf10 48 pf10:215717w|pf10_0049 pf10_1:215717w pf10_0049 chr10_1.glm_66|01jun01 vbc 6 3240 215717 215805 216128 218672 218818 218975 219060 219164 219273 219488 219633 219759 pf10 49 pf10:220018c|pf10_0050 pf10_1:220018c pf10_0050 chr10_1.glm_67|01jun01 vbc 4 840 220018 220350 220537 220637 220726 220998 221221 221353 pf10 50 pf10:221945w|pf10_0051 pf10_1:221945w pf10_0051 chr10_1.glm_68+69|01jun01 vbc 3 1023 221945 222152 222281 222595 222931 223430 pf10 51 pf10:224248w|pf10_0052 pf10_1:224248w pf10_0052 chr10_1.glm_70|01jun01 glm 1 960 224248 225207 pf10 52 pf10:225456c|pf10_0053 pf10_1:225456c pf10_0053 chr10_1.glm_71|01jun01 glm 1 2250 225456 227705 pf10 53 pf10:228798w|pf10_0054 pf10_1:228798w pf10_0054 chr10_1.glm_72|01jun01 glm 1 3396 228798 232193 pf10 54 pf10:233285c|pf10_0055 pf10_1:233285c pf10_0055 chr10_1.glm_73+74|01jun01 vbc 2 1032 233285 234125 234283 234473 pf10 55 pf10:234795c|pf10_0056 pf10_1:234795c pf10_0056 chr10_1.glm_75|01jun01 vbc 2 801 234795 235585 235736 235745 pf10 56 pf10:237506c|pf10_0057 pf10_1:237506c pf10_0057 chr10_1.glm_76+77|01jun01 vbc 1 4739 frameshift near 241451 241452c [AA] 237506 242244 pf10 57 pf10:244144c|bis pf10_1:244144c bis pf10_0058 chr10_1.glm_78|01jun01 glm 1 2391 244144 246534 pf10 58 pf10:247494c|bis pf10_1:247494c bis 0058 chr10_1.glm_79|01jun01 vbc 2 2319 247494 249288 249416 249939 pf10 59 pf10:251578w|pf10_0059|03oct02 pf10_1:251578w pf10_0059|03oct02 tigr 2 681 251578 252127 252359 252489 pf10 60 pf10:253703w|pf10_0060 pf10_1:253703w pf10_0060 chr10_1.glm_81|01jun01 glm 1 1908 253703 255610 pf10 61 pf10:256116c|pf10_0061 pf10_1:256116c pf10_0061 chr10_1.glm_81.1=gen_386=phat_64|01jun01 gen phat 2 1281 256116 256268 256571 257698 pf10 62 pf10:259059c|pf10_0062 pf10_1:259059c pf10_0062 chr10_1.glm_82|03oct02 vbc 5 582 259059 259129 259360 259519 259718 259778 259872 260078 260221 260303 pf10 63 pf10:262149c|pf10_0063 pf10_1:262149c pf10_0063 chr10_1.glm_83|01jun01 vbc 3 324 262149 262258 262464 262626 262946 262996 pf10 64 pf10:265749c|bis pf10_1:265749c bis pf10_0063 chr10_1.glm_85.2|01jun01 vbc 6 303 265749 265802 265921 265947 266082 266125 266220 266289 266393 266484 266820 266835 pf10 65 pf10:267218c|pf10_0064 pf10_1:267218c pf10_0064 chr10_1.glm_85.1|01jun01 vbc 1 2613 267218 269830 pf10 66 pf10:270534w|pf10_0065 pf10_1:270534w pf10_0065 chr10_1.glm_86|01jun01 glm 1 963 270534 271496 pf10 67 pf10:272242c|pf10_0066 pf10_1:272242c pf10_0066 chr10_1.glm_87|01jun01 glm 1 582 272242 272823 pf10 68 pf10:274090w|pf10_0067 pf10_1:274090w pf10_0067 chr10_1.glm_88|01jun01 glm 2 1152 274090 274197 274382 275425 pf10 69 pf10:277791w|pf10_0068 pf10_1:277791w pf10_0068 chr10_1.glm_89+90|01jun01 vbc 4 795 277791 277862 278071 278208 278352 278430 278662 279167 pf10 70 pf10:281458w|pf10_0069 pf10_1:281458w pf10_0069 chr10_1.glm_91=gen_28=phat_70.1|01jun01 vbc 7 714 included coding 2820447..282120 (at)8 281458 281665 281890 281949 282047 282079 282250 282436 282532 282572 282784 282875 283011 283103 pf10 71 pf10:284640w|pf10_0070 pf10_1:284640w pf10_0070 chr10_1.glm_94=phat_70.2|01jun01 vbc 8 819 284640 284652 284781 284953 285092 285148 285265 285329 285405 285505 285620 285684 285815 285939 286082 286301 pf10 72 pf10:286521c|bis pf10_1:286521c bis pf10_0070 chr10_1.glm_95|01jun01 vbc 4 351 286521 286658 286840 286891 286965 287031 287379 287472 pf10 73 pf10:288382c|pf10_0071 pf10_1:288382c pf10_0071 chr10_1.glm_96|01jun01 vbc 5 1782 288382 288999 289169 290016 290197 290309 290442 290555 290737 290825 pf10 74 pf10:293849w|pf10_0072 pf10_1:293849w pf10_0072 chr10_1.glm_98|01jun01 vbc 2 1941 293849 295012 295222 295998 pf10 75 pf10:296713w|pf10_0073 pf10_1:296713w pf10_0073 chr10_1.glm_99|01jun01 vbc 2 705 296713 296753 296901 297564 pf10 76 pf10:298360w|bis pf10_1:298360w bis pf10_0073 chr10_1.glm_100|01jun01 glm 1 327 298360 298686 pf10 77 pf10:299279w|pf10_0074 pf10_1:299279w pf10_0074 chr10_1.glm_101|01jun01 glm 1 330 299279 299608 pf10 78 pf10:301125c|pf10_0075 pf10_1:301125c pf10_0075 chr10_1.glm_102|01jun01 glm 1 4794 301125 305918 pf10 79 pf10:311396c|pf10_0076 pf10_1:311396c pf10_0076 chr10_1.glm_103|01jun01 glm 1 3120 311396 314515 pf10 80 pf10:316648w|pf10_0077 pf10_1:316648w pf10_0077 chr10_1.glm_104|01jun01 glm 1 1632 316648 318279 pf10 81 pf10:321010w|pf10_0078 pf10_1:321010w pf10_0078 chr10_1.glm_105|01jun01 glm 1 7140 321010 328149 pf10 82 pf10:331248w|pf10_0079 pf10_1:331248w pf10_0079 chr10_1.glm_106|01jun01 vbc 1 11559 331248 342806 pf10 83 pf10:343732c|pf10_0080 pf10_1:343732c pf10_0080 chr10_1.glm_107|01jun01 glm 1 1167 343732 344898 pf10 84 pf10:347205c|pf10_0081 pf10_1:347205c pf10_0081 chr10_1.glm_108|01jun01 vbc 2 1347 347205 348505 348621 348666 pf10 85 pf10:351702w|pf10_0082 pf10_1:351702w pf10_0082 chr10_1.glm_109|01jun01 vbc 1 3892 frameshift near 355016 355015w [C] 351702 355593 pf10 86 pf10:357357w|pf10_0083 pf10_1:357357w pf10_0083 chr10_1.gen_39=phat_81|01jun01 gen phat 1 1107 357357 358463 pf10 87 pf10:360625c|pf10_0084 pf10_1:360625c pf10_0084 chr10_1.glm_110|01jun01 vbc 3 1338 360625 360913 361082 362034 362385 362480 pf10 88 pf10:365737c|pf10_0085 pf10_1:365737c pf10_0085 chr10_1.glm_111|01jun01 glm 1 1410 365737 367146 pf10 89 pf10:369199c|pf10_0086 pf10_1:369199c pf10_0086 chr10_1.glm_112|01jun01 vbc 2 729 369199 369804 370103 370225 pf10 90 pf10:371293w|pf10_0087 pf10_1:371293w pf10_0087 chr10_1.glm_113|01jun01 glm 1 825 371293 372117 pf10 91 pf10:372519w|pf10_0088 pf10_1:372519w pf10_0088 chr10_1.glm_114|01jun01 glm 1 1554 372519 374072 pf10 92 pf10:374864w|pf10_0089 pf10_1:374864w pf10_0089 chr10_1.glm_115|01jun01 glm 1 2748 374864 377611 pf10 93 pf10:377906c|pf10_0090 pf10_1:377906c pf10_0090 chr10_1.glm_116|01jun01 vbc 1 1836 377906 379741 pf10 94 pf10:381361w|pf10_0091 pf10_1:381361w pf10_0091 chr10_1.glm_117|01jun01 glm 1 1089 381361 382449 pf10 95 pf10:383044c|pf10_0092 pf10_1:383044c pf10_0092 chr10_1.glm_118|01jun01 glm 4 1128 383044 383135 383398 384214 384316 384420 384680 384793 pf10 96 pf10:386976w|pf10_0093 pf10_1:386976w pf10_0093 chr10_1.glm_119|01jun01 vbc 1 1466 frameshift: base missing before 387696 387696w [TG] 386976 388441 pf10 97 pf10:389503c|pf10_0094 pf10_1:389503c pf10_0094 chr10_1.glm_120|01jun01 vbc 2 1728 389503 391138 391567 391658 pf10 98 pf10:393764c|pf10_0095 pf10_1:393764c pf10_0095 chr10_1.glm_121|01jun01 glm 2 4038 393764 393851 394043 397992 pf10 99 pf10:399206w|pf10_0096 pf10_1:399206w pf10_0096 chr10_1.glm_122|01jun01 glm 2 2340 399206 401446 401679 401777 pf10 100 pf10:401875c|pf10_0097 pf10_1:401875c pf10_0097 chr10_1.glm_123|01jun01 vbc 2 642 401875 402180 402375 402710 pf10 101 pf10:403678w|pf10_0098 pf10_1:403678w pf10_0098 chr10_1.glm_124|01jun01 vbc 1 897 403678 404574 pf10 102 pf10:405015c|pf10_0099 pf10_1:405015c pf10_0099 chr10_1.glm_125|03oct02 tigr/vbc /vbc 1 5521 frameshift near 410001 410001c [A] 405015 410535 pf10 103 pf10:414731w|pf10_0100 pf10_1:414731w pf10_0100 chr10_1.glm_126|01jun01 vbc 3 357 414731 415002 415102 415163 415305 415327 pf10 104 pf10:416020c|pf10_0101 pf10_1:416020c pf10_0101 chr10_1.glm_127+128+129|01jun01 vbc 5 1008 416020 416135 416257 416346 416432 416554 416653 417141 417281 417470 pf10 105 pf10:418418w|pf10_0102 pf10_1:418418w pf10_0102 chr10_1.glm_130|01jun01 vbc 4 333 418418 418567 418685 418732 418931 418981 419059 419142 pf10 106 pf10:420184c|pf10_0103 pf10_1:420184c pf10_0103 chr10_1.glm_131|01jun01 vbc 2 669 420184 420259 420463 421055 pf10 107 pf10:422960w|pf10_0104 pf10_1:422960w pf10_0104 chr10_1.glm_132|01jun01 vbc 7 672 422960 423081 423230 423281 423417 423477 423636 423757 423875 424020 424103 424208 424302 424364 pf10 108 pf10:424996c|pf10_0105 pf10_1:424996c pf10_0105 chr10_1.glm_133|01jun01 glm 1 768 424996 425763 pf10 109 pf10:426599w|pf10_0106 pf10_1:426599w pf10_0106 chr10_1.glm_134|01jun01 vbc 5 1050 426599 426664 426795 427570 427739 427834 427936 427984 428082 428144 pf10 110 pf10:429202c|pf10_0107 pf10_1:429202c pf10_0107 chr10_1.glm_135|01jun01 vbc 4 435 429202 429414 429586 429660 429771 429844 430067 430139 pf10 111 pf10:432504c|pf10_0108 pf10_1:432504c pf10_0108 chr10_1.glm_136|01jun01 vbc 2 2952 432504 432738 432853 435569 pf10 112 pf10:436957w|pf10_0109 pf10_1:436957w pf10_0109 chr10_1.glm_137=phat106.1|01jun01 vbc 4 345 436957 437085 437189 437245 437406 437480 437624 437707 pf10 113 pf10:438445w| pf10_1:438445w pf10_0110 chr10_1.glm_137.1=phat106.2|01jun01 vbc 1 1935 438445 440379 pf10 114 pf10:441139c|pf10_0111 pf10_1:441139c pf10_0111 chr10_1.glm_138|01jun01 vbc 1 816 441139 441954 pf10 115 pf10:443873c|pf10_0112 pf10_1:443873c pf10_0112 chr10_1.glm_139|01jun01 glm 1 528 443873 444400 pf10 116 pf10:445163c|pf10_0113 pf10_1:445163c pf10_0113 chr10_1.glm_140|01jun01 vbc 1 1962 445163 447124 pf10 117 pf10:449153w|pf10_0114 pf10_1:449153w pf10_0114 chr10_1.glm_141|01jun01 glm 1 1170 449153 450322 pf10 118 pf10:455397w|pf10_0115 pf10_1:455397w pf10_0115 chr10_1.glm_143|01jun01 glm 1 3420 455397 458816 pf10 119 pf10:460334c|pf10_0116 pf10_1:460334c pf10_0116 chr10_1.glm_144+145|01jun01 vbc 6 918 460334 460459 460588 460727 460820 460901 461099 461260 461373 461499 461712 461992 pf10 120 pf10:463492w|pf10_0117 pf10_1:463492w pf10_0117 chr10_1.glm_146+147|01jun01 tigr 9 2382 463492 464655 464831 464972 465076 465172 465325 465435 465587 465648 465740 465777 465885 465968 466126 466226 466423 467005 pf10 121 pf10:468070c|pf10_0118 pf10_1:468070c pf10_0118 chr10_1.glm_148|01jun01 vbc 3 1206 468070 469181 469342 469374 469484 469544 pf10 122 pf10:470978w|pf10_0119 pf10_1:470978w pf10_0119 chr10_1.glm_149|01jun01 glm 2 804 470978 471547 471699 471932 pf10 123 pf10:472545c|pf10_0120 pf10_1:472545c pf10_0120 chr10_1.glm_150|01jun01 glm 2 579 472545 472915 473178 473385 pf10 124 pf10:475326c|pf10_0121 pf10_1:475326c pf10_0121 chr10_1.glm_151|03oct02 tigr 3 696 475326 475910 476245 476338 476546 476562 pf10 125 pf10:478757c|pf10_0122 pf10_1:478757c pf10_0122 chr10_1.glm_152|01jun01 glm 1 1782 478757 480538 pf10 126 pf10:482526c|pf10_0123 pf10_1:482526c pf10_0123 chr10_1.glm_153|01jun01 glm 1 1668 482526 484193 pf10 127 pf10:487251w|pf10_0124 pf10_1:487251w pf10_0124 chr10_1.glm_154|01jun01 vbc 3 4317 487251 491271 491404 491605 491734 491827 pf10 128 pf10:492549w|pf10_0125 pf10_1:492549w pf10_0125 chr10_1.glm_155|01jun01 glm 1 2595 492549 495143 pf10 129 pf10:496330c|pf10_0126 pf10_1:496330c pf10_0126 chr10_1.glm_156|01jun01 vbc 2 1143 496330 497342 497443 497572 pf10 130 pf10:500209w|pf10_0127 pf10_1:500209w pf10_0127 chr10_1.glm_157|01jun01 vbc 4 1563 500209 500287 500454 500520 500652 500746 500899 502220 pf10 131 pf10:502633c|pf10_0128 pf10_1:502633c pf10_0128 chr10_1.glm_158|01jun01 glm 2 3663 502633 504060 504157 506391 pf10 132 pf10:511083w|pf10_0129 pf10_1:511083w pf10_0129 chr10_1.glm_159|01jun01 glm 1 3195 511083 514277 pf10 133 pf10:515720c|pf10_0130 pf10_1:515720c pf10_0130 chr10_1.glm_160|01jun01 vbc 1 1887 515720 517606 pf10 134 pf10:518322c|pf10_0131 pf10_1:518322c pf10_0131 chr10_1.glm_161+162+163|01jun01 vbc 11 2505 518322 518461 518672 518785 518875 519355 519473 519698 519803 519867 520045 520128 520236 520418 520623 520730 520867 520941 521071 521171 521324 522251 pf10 135 pf10:526839w|pf10_0132 pf10_1:526839w pf10_0132 chr10_1.glm_163.1=gen_64=phat_127|01jun01 gen 4 4158 526839 530764 530910 530988 531180 531241 531357 531447 pf10 136 pf10:533108w|pf10_0133 pf10_1:533108w pf10_0133 chr10_1.glm_164|01jun01 glm 1 6717 533108 539824 pf10 137 pf10:540594w|pf10_0134 pf10_1:540594w pf10_0134 chr10_1.glm_165|01jun01 vbc 3 603 540594 540853 541107 541337 541582 541693 pf10 138 pf10:542358w|pf10_0135 pf10_1:542358w pf10_0135 chr10_1.glm_166|01jun01 vbc 4 1542 542358 542426 542855 542942 543068 544049 544153 544555 pf10 139 pf10:545678c|pf10_0136 pf10_1:545678c pf10_0136 chr10_1.glm_167|01jun01 glm 1 3225 545678 548902 pf10 140 pf10:550838c|pf10_0137 pf10_1:550838c pf10_0137 chr10_1.glm_168|01jun01 vbc 7 1035 550838 550893 551039 551105 551223 551258 551368 551432 551572 551748 551827 552109 552220 552570 pf10 141 pf10:555159w|pf10_0138 pf10_1:555159w pf10_0138 chr10_1.glm_169|01jun01 glm 1 4368 555159 559526 pf10 142 pf10:560537w|pf10_0139 pf10_1:560537w pf10_0139 chr10_1.glm_170+171|01jun01 vbc 2 2670 560537 560776 560923 563352 pf10 143 pf10:565741w|pf10_0140 pf10_1:565741w pf10_0140 chr10_1.glm_172|01jun01 glm 2 7203 565741 572668 572785 573059 pf10 144 pf10:574128w|pf10_0141 pf10_1:574128w pf10_0141 chr10_1.glm_173|01jun01 glm 1 975 574128 575102 pf10 145 pf10:576578w|pf10_0142 pf10_1:576578w pf10_0142 chr10_1.glm_174|01jun01 glm 1 3900 576578 580477 pf10 146 pf10:581353c|pf10_0143 pf10_1:581353c pf10_0143 chr10_1.glm_175|01jun01 glm 1 7737 581353 589089 pf10 147 pf10:595306w|pf10_0144 pf10_1:595306w pf10_0144 chr10_1.glm_176|01jun01 glm 1 915 595306 596220 pf10 148 pf10:596495c|pf10_0145 pf10_1:596495c pf10_0145 chr10_1.glm_177+178|01jun01 vbc 9 2481 596495 596542 596650 596755 596847 597144 597314 597389 597475 597868 597972 598887 599046 599422 599552 599602 599817 600031 pf10 149 pf10:600969c|pf10_0146 pf10_1:600969c pf10_0146 chr10_1.glm_179|01jun01 glm 1 6840 600969 607808 pf10 150 pf10:611212w|pf10_0147 pf10_1:611212w pf10_0147 chr10_1.glm_180|01jun01 glm 1 987 611212 612198 pf10 151 pf10:612684c|pf10_0148 pf10_1:612684c pf10_0148 chr10_1.glm_181|01jun01 glm 1 1191 612684 613874 pf10 152 pf10:614871c|pf10_0149 pf10_1:614871c pf10_0149 chr10_1.glm_182|01jun01 vbc 2 1782 614871 616535 616679 616795 pf10 153 pf10:618439w|pf10_1:618439w pf10_1:618439w pf10_0150 chr10_1.glm_183+chrblob_3196|01jun01 glm 1 1554 618439 619992 pf10 154 pf10:621303w|pf10_0151 pf10_1:621303w pf10_0151 chr10_1.glm_184|01jun01 glm 1 2322 621303 623624 pf10 155 pf10:624046c|pf10_0152 pf10_1:624046c pf10_0152 chr10_1.glm_185|01jun01 glm 1 1902 624046 625947 pf10 156 pf10:627042c|pf10_0153 pf10_1:627042c pf10_0153 chr10_1.glm_186|01jun01 vbc 2 1743 627042 628642 628897 629038 pf10 157 pf10:629986c|bis pf10_1:629986c bis pf10_0153 chr10_1.glm_186.1=phat_149|01jun01 vbc 9 930 629986 630063 630200 630332 630460 630527 630635 630707 630844 630917 630997 631051 631179 631399 631553 631713 631994 632060 pf10 158 pf10:633681w|pf10_0154 pf10_1:633681w pf10_0154 chr10_1.glm_187|01jun01 vbc 5 1008 633681 633767 633890 633922 634048 634184 634411 635068 635193 635285 pf10 159 pf10:637137w|pf10_0155 pf10_1:637137w pf10_0155 chr10_1.glm_188|01jun01 glm 2 1341 637137 637179 637713 639010 pf10 160 pf10:641389w|pf10_0156 pf10_1:641389w pf10_0156 chr10_1.glm_189|01jun01 glm 1 1362 641389 642750 pf10 161 pf10:643557c|pf10_0157 pf10_1:643557c pf10_0157 chr10_1.glm_190|01jun01 vbc 1 624 643557 644180 pf10 162 pf10:646052w|pf10_0158 pf10_1:646052w pf10_0158 chr10_1.glm_191|01jun01 glm 1 1683 646052 647734 pf10 163 pf10:650897c|pf10_0159 pf10_1:650897c pf10_0159 chr10_1.glm_192+193|01jun01 vbc 2 2475 650897 653182 653378 653566 pf10 164 pf10:656708c|pf10_0160 pf10_1:656708c pf10_0160 chr10_1.glm_194+195|01jun01 vbc 3 1830 656708 656788 656996 658546 658829 659026 pf10 165 pf10:661740c|pf10_0161 pf10_1:661740c pf10_0161 chr10_1.glm_196|01jun01 glm 2 2304 661740 663839 663996 664199 pf10 166 pf10:665657c|bis pf10_1:665657c bis pf10_0161 chr10_1.glm_197|01jun01 glm 2 891 665657 666406 666513 666653 pf10 167 pf10:669201c|pf10_0162 pf10_1:669201c pf10_0162 chr10_1.glm_198|01jun01 vbc 2 2433 669201 671489 671709 671852 pf10 168 pf10:675292c|pf10_0163 pf10_1:675292c pf10_0163 chr10_1.glm_199|01jun01 glm 2 945 675292 676086 676267 676416 pf10 169 pf10:682181c|pf10_0164 pf10_1:682181c pf10_0164 chr10_1.glm_200|01jun01 glm qimr:ts etramp etramp 1 327 alignment 682338 down to 682325 682181 682507 pf10 170 pf10:685577w|pf10_0165 pf10_1:685577w pf10_0165 chr10_1.glm_203|01jun01 glm 1 3285 685577 688861 pf10 171 pf10:689887c|pf10_0166 pf10_1:689887c pf10_0166 chr10_1.glm_204|01jun01 vbc 1 933 689887 690819 pf10 172 pf10:692425w|pf10_0167 pf10_1:692425w pf10_0167 chr10_1.glm_205|01jun01 vbc 2 1593 692425 693951 694152 694217 pf10 173 pf10:694839c|pf10_0168 pf10_1:694839c pf10_0168 chr10_1.glm_206|01jun01 vbc 1 1740 694839 696578 pf10 174 pf10:697969c|pf10_0169 pf10_1:697969c pf10_0169 chr10_1.glm_207|03oct02 tigr/vbc /vbc 8 735 repetition period 21 697969 698070 698220 698300 698432 698495 698667 698810 698913 699004 699187 699263 699368 699479 699760 699822 pf10 175 pf10:701745w|pf10_0170 pf10_1:701745w pf10_0170 chr10_1.glm_209|01jun01 vbc 3 405 701745 701891 702070 702198 702293 702421 pf10 176 pf10:705536w|pf10_0171 pf10_1:705536w pf10_0171 chr10_1.glm_210|01jun01 glm 1 2916 705536 708451 pf10 177 pf10:709506w|pf10_0172 pf10_1:709506w pf10_0172 chr10_1.glm_210.1=gen_83=phat+167|24oct01 gen phat 1 1320 (ry)12 709506 710825 pf10 178 pf10:711015c|pf10_0173 pf10_1:711015c pf10_0173 chr10_1.glm_210.2=gen_323=phat_168 b3231|24oct01 gen 3 3411 711015 711038 711150 711265 711387 714657 pf10 179 pf10:715877w|pf10_0174 pf10_1:715877w pf10_0174 chr10_1.glm_211+212|01jun01 vbc 2 1404 715877 715999 716156 717436 pf10 180 pf10:718453w|pf10_0175 pf10_1:718453w pf10_0175 chr10_1.glm_213|01jun01 glm 1 1683 718453 720135 pf10 181 pf10:720550w|pf10_0176 pf10_1:720550w pf10_0176 chr10_1.glm_213.1=gen_86=phat_171|01jun01 gen phat 1 849 720550 721398 pf10 182 pf10:721733c|pf10_0177 pf10_1:721733c pf10_0177 pf10_0177 pf10_0177.2c chr10_1.glm_214|01jun01 vbc 2 6501 721733 721820 721918 728330 pf10 183 pf10:729808c|bis pf10_1:729808c bis pf10_0177 pf10_0177.1c chr10_1.glm_216|01jun01 glm 1 3048 729808 732855 pf10 184 pf10:734721w|pf10_0178 pf10_1:734721w pf10_0178 chr10_1.glm_217|01jun01 vbc 4 600 734721 734778 734885 734933 735072 735111 735285 735737 pf10 185 pf10:735920c|pf10_0179 pf10_1:735920c pf10_0179 pf10_0179.1c chr10_1.glm_218|01jun01 vbc 5 336 735920 736009 736139 736216 736395 736507 736651 736689 736797 736812 pf10 186 pf10:737691c|bis pf10_1:737691c bis pf10_0179 pf10_0179.2c chr10_1.glm_219+b3256|01jun01 vbc 1 5697 737691 743387 pf10 187 pf10:747027w|pf10_0180 pf10_1:747027w pf10_0180 chr10_1.glm_220|01jun01 glm 1 1860 747027 748886 pf10 188 pf10:750214w|pf10_0181 pf10_1:750214w pf10_0181 chr10_1.glm_221|01jun01 vbc 2 2127 750214 752148 752473 752664 pf10 189 pf10:752759c|pf10_0182 pf10_1:752759c pf10_0182 chr10_1.glm_222|01jun01 glm 1 2151 752759 754909 pf10 190 pf10:757794w|pf10_0183 pf10_1:757794w pf10_0183 chr10_1.glm_223|01jun01 glm 2 7218 757794 764822 764969 765157 pf10 191 pf10:766167c|pf10_0184 pf10_1:766167c pf10_0184 chr10_1.glm_224|01jun01 glm 1 5787 766167 771953 pf10 192 pf10:773584w|pf10_0185 pf10_1:773584w pf10_0185 chr10_1.glm_225|01jun01 vbc 1 906 773584 774489 pf10 193 pf10:774993c|pf10_0186 pf10_1:774993c pf10_0186 chr10_1.glm_226|01jun01 vbc 3 5223 774993 779995 780163 780255 780360 780486 pf10 194 pf10:786502w|pf10_0187 pf10_1:786502w pf10_0187 chr10_1.glm_227|01jun01 glm 2 327 786502 786625 786805 787007 pf10 195 pf10:787744c|pf10_0188 pf10_1:787744c pf10_0188 chr10_1.glm_228+229+231+232|01jun01 vbc 26 3663 ata ata ta|c tac 787744 787905 788099 788249 788464 788626 788817 789015 789124 789261 789329 789369 789448 789492 789611 789741 789886 790001 790141 790221 790360 790435 790588 790706 790854 790918 791081 791287 791504 791624 791791 792019 792209 792334 792445 792764 792900 793107 793253 793357 793488 793806 793893 793974 794109 794270 794379 794482 794640 794766 795154 795219 pf10 196 pf10:796290w|pf10_0189 pf10_1:796290w pf10_0189 chr10_1.glm_234|01jun01 glm 1 3633 796290 799922 pf10 197 pf10:800276c|pf10_0190 pf10_1:800276c pf10_0190 chr10_1.glm_235|01jun01 glm 1 3225 800276 803500 pf10 198 pf10:804326c|pf10_0191+pf10_0192 pf10_1:804326c pf10_0191+pf10_0192 chr10_1.glm_236+237|01jun01 vbc 1 3133 frameshift: extra base at 805018 805018c [T] 804326 807458 pf10 199 pf10:808617c|pf10_0193 pf10_1:808617c pf10_0193 chr10_1.glm_238|01jun01 glm 1 375 808617 808991 pf10 200 pf10:811105c|pf10_0194 pf10_1:811105c pf10_0194 chr10_1.glm_239+240|01jun01 vbc 10 969 811105 811223 811396 811495 811678 811755 811849 811889 811993 812146 812324 812398 812494 812571 812904 813019 813155 813271 813393 813483 pf10 201 pf10:814351c|pf10_0195 pf10_1:814351c pf10_0195 pf10_0195.1c|03oct02 vbc 3 330 814351 814467 814607 814792 814930 814956 pf10 202 pf10:816065c|bis pf10_1:816065c bis pf10_0195 pf10_0195.2c chr10_1.glm_241+242+243|01jun01 vbc 3 2469 816065 817786 818136 818716 818803 818968 pf10 203 pf10:819829w|pf10_0196 pf10_1:819829w pf10_0196 chr10_1.glm_244|01jun01 glm 1 2310 819829 822138 pf10 204 pf10:822601c|pf10_0197 pf10_1:822601c pf10_0197 chr10_1.glm_245+b3177|01jun01 glm 2 1806 822601 824301 824488 824592 pf10 205 pf10:825450w|pf10_0198 pf10_1:825450w pf10_0198 chr10_1.glm_246|01jun01 glm 1 1521 825450 826970 pf10 206 pf10:827487w|pf10_0199 pf10_1:827487w pf10_0199 chr10_1.glm_247|01jun01 vbc 3 6405 827487 827552 827659 827781 828015 834230 pf10 207 pf10:835291w|pf10_0200 pf10_1:835291w pf10_0200 chr10_1.glm_248|01jun01 glm 2 3717 835291 838800 838931 839137 pf10 208 pf10:840211w|olim pf10_1:840211w olim pf10_0201+olim_pf10_0202 chr10_1.glm_249+250+251|01jun01 vbc 11 1923 840211 840453 840663 840729 840834 841223 841339 841418 841500 841546 841647 841742 841865 841945 842050 842092 842195 842274 842339 842822 843091 843402 pf10 209 pf10:845085c|pf10_0203 pf10_1:845085c pf10_0203 chr10_1.glm_252|01jun01 glm 5 546 845085 845172 845293 845443 845592 845679 845810 845880 846044 846191 pf10 210 pf10:848858.1c|pf10_0204+pf10_0205 pf10_1:848858.1c pf10_0204+pf10_0205 chr10_1.glm_253|01jun01|alt1 vbc 4 1062 848858 848952 849041 849538 849795 850027 850167 850402 pf10 211 pf10:849790.2c|pf10_0204+pf10_0205 pf10_1:849790.2c pf10_0204+pf10_0205 chr10_1.glm_253|01jun01|alt2 vbc 2 474 849790 850027 850167 850402 pf10 212 pf10:850998c|bis pf10_1:850998c bis pf10_0205 chr10_1.glm_254|01jun01 glm 1 5286 850998 856283 pf10 213 pf10:857671c|pf10_0206 pf10_1:857671c pf10_0206 chr10_1.glm_255|01jun01 glm 1 2070 857671 859740 pf10 214 pf10:860853c|pf10_0207 pf10_1:860853c pf10_0207 chr10_1.glm_257|01jun01 vbc 3 1263 860853 860957 861165 861397 861523 862447 pf10 215 pf10:863905w|pf10_0208 pf10_1:863905w pf10_0208 chr10_1.glm_258+b3116|01jun01 vbc 7 1860 863905 863997 864124 864507 864683 864792 865010 865888 866102 866169 866293 866374 866497 866740 pf10 216 pf10:867633c|pf10_0209 pf10_1:867633c pf10_0209 chr10_1.glm_259|01jun01 glm 1 2043 867633 869675 pf10 217 pf10:871093w|pf10_0210 pf10_1:871093w pf10_0210 chr10_1.glm_260|01jun01 glm 1 792 871093 871884 pf10 218 pf10:873206c|pf10_0211+pf10_0212 pf10_1:873206c pf10_0211+pf10_0212 chr10_1.glm_261+262|01jun01 vbc 5 20805 873206 873464 873595 874030 874200 887024 887425 894508 894667 894867 pf10 219 pf10:897119c|bis pf10_1:897119c bis pf10_0212 chr10_1.glm_263+264|01jun01 vbc 3 6218 base missing or deletion between 900001 and 900002 ? assembly 900002c [GaT] 897119 897271 897436 897528 897634 903605 pf10 220 pf10:905470c|pf10_0213 pf10_1:905470c pf10_0213 chr10_1.glm_265|03oct02 tigr 1 6873 905470 912342 pf10 221 pf10:919770w|pf10_0214 pf10_1:919770w pf10_0214 chr10_1.glm_266|01jun01 vbc 2 4281 919770 921309 921471 924211 pf10 222 pf10:925278c|pf10_0215 pf10_1:925278c pf10_0215 chr10_1.glm_267|01jun01 glm 2 780 925278 925816 925988 926228 pf10 223 pf10:926829c|bis pf10_1:926829c bis pf10_0215 chr10_1.glm_268|01jun01 glm 3 1890 926829 926894 927040 927757 927913 929018 pf10 224 pf10:932695w|pf10_0216 pf10_1:932695w pf10_0216 chr10_1.glm_269|01jun01 vbc 6 978 932695 932839 932952 933383 933632 933750 933911 933998 934082 934146 934251 934379 pf10 225 pf10:941180c|pf10_0217 pf10_1:941180c pf10_0217 chr10_1.glm_270|01jun01 vbc 4 1617 941180 942524 942633 942719 943154 943236 943375 943476 pf10 226 pf10:945640c|pf10_0218 pf10_1:945640c pf10_0218 chr10_1.glm_271|01jun01 glm 1 1692 945640 947331 pf10 227 pf10:949719w|pf10_0219 pf10_1:949719w pf10_0219 chr10_1.glm_272|01jun01 glm 1 2676 949719 952394 pf10 228 pf10:952994c|pf10_0220 pf10_1:952994c pf10_0220 chr10_1.glm_273|01jun01 glm 1 828 952994 953821 pf10 229 pf10:957125w|pf10_0221 pf10_1:957125w pf10_0221 chr10_1.glm_274|01jun01 glm 1 2475 957125 959599 pf10 230 pf10:960181c|pf10_0222 pf10_1:960181c pf10_0222 chr10_1.glm_274.1=gen_294|01jun01 gen 4 357 960181 960276 960484 960587 960773 960842 961052 961138 pf10 231 pf10:962308c|pf10_0223 pf10_1:962308c pf10_0223 chr10_1.glm_275|01jun01 glm 1 1242 962308 963549 pf10 232 pf10:964739c|pf10_0224 pf10_1:964739c pf10_0224 chr10_1.glm_276|01jun01 glm 1 17064 964739 981802 pf10 233 pf10:983473w|pf10_0225 pf10_1:983473w pf10_0225 chr10_1.glm_277|01jun01 glm 1 972 983473 984444 pf10 234 pf10:985470c|pf10_0226 pf10_1:985470c pf10_0226 chr10_1.glm_278|01jun01 vbc 4 393 many repeated amino acids 985470 985576 985711 985788 986207 986336 986404 986481 pf10 235 pf10:986592w|pf10_0227w|03oct02 pf10_1:986592w pf10_0227w|03oct02 tigr 6 570 986592 986667 986778 986817 987269 987308 987443 987662 987745 987846 988002 988093 pf10 236 pf10:988600c|pf10_0228+pf10_0229 pf10_1:988600c pf10_0228+pf10_0229 chr10_1.glm_280+281|01jun01 vbc 8 1554 988600 988656 988890 989068 989371 990079 990275 990677 990859 990967 991076 991112 991215 991250 991367 991390 pf10 237 pf10:992389w|pf10_0230 pf10_1:992389w pf10_0230 chr10_1.glm_282|01jun01 glm 1 2274 992389 994662 pf10 238 pf10:995564w|pf10_0231 pf10_1:995564w pf10_0231 chr10_1.glm_283+284|01jun01 vbc 2 2274 995564 995778 995972 998030 pf10 239 pf10:998717c|pf10_0232 pf10_1:998717c pf10_0232 chr10_1.glm_285|01jun01 glm 1 9987 998717 1008703 pf10 240 pf10:1016138w|pf10_0233 pf10_1:1016138w pf10_0233 chr10_1.glm_285.1=gen_111|01jun01 gen 1 1701 1016138 1017838 pf10 241 pf10:1018443c|pf10_0234 pf10_1:1018443c pf10_0234 chr10_1.glm_286|01jun01 vbc 1 3315 1018443 1021757 pf10 242 pf10:1022534c|pf10_0235 pf10_1:1022534c pf10_0235 chr10_1.glm_287|01jun01 glm 1 483 1022534 1023016 pf10 243 pf10:1023747w|pf10_0236 pf10_1:1023747w pf10_0236 chr10_1.glm_288|01jun01 glm 1 393 1023747 1024139 pf10 244 pf10:1024447c|pf10_0237 pf10_1:1024447c pf10_0237 chr10_1.glm_289|01jun01 vbc 2 1509 1024447 1024592 1024749 1026111 pf10 245 pf10:1027362w|pf10_0238 pf10_1:1027362w pf10_0238 chr10_1.glm_291|01jun01 glm 1 795 1027362 1028156 pf10 246 pf10:1028370c|pf10_0239 pf10_1:1028370c pf10_0239 chr10_1.glm_292|01jun01 vbc 4 381 1028370 1028417 1028582 1028626 1028729 1028833 1028925 1029107 pf10 247 pf10:1029393c|pf10_0240 pf10_1:1029393c pf10_0240 chr10_1.glm_293|01jun01 vbc 2 900 1029393 1029665 1029983 1030609 pf10 248 pf10:1031286w|pf10_0241 pf10_1:1031286w pf10_0241 chr10_1.glm_294|01jun01 glm 1 1491 1031286 1032776 pf10 249 pf10:1035927w|pf10_0242 pf10_1:1035927w pf10_0242 chr10_1.glm_295|01jun01 glm 1 4395 1035927 1040321 pf10 250 pf10:1041531c|pf10_0243 pf10_1:1041531c pf10_0243 chr10_1.glm_296|01jun01 glm 1 4716 1041531 1046246 pf10 251 pf10:1046850c|pf10_0244 pf10_1:1046850c pf10_0244 chr10_1.glm_297+298|01jun01 vbc 7 2943 1046850 1046927 1047047 1047160 1047271 1049261 1049442 1049837 1050362 1050485 1050613 1050706 1050857 1051002 pf10 252 pf10:1054086w|pf10_0245 pf10_1:1054086w pf10_0245 chr10_1.glm_299|01jun01 glm 1 2490 1054086 1056575 pf10 253 pf10:1056986c|pf10_0246 pf10_1:1056986c pf10_0246 chr10_1.glm_300|01jun01 vbc 1 1287 1056986 1058272 pf10 254 pf10:1059132c|bis pf10_1:1059132c bis pf10_0246 chr10_1.glm_301|01jun01 glm 1 2769 1059132 1061900 pf10 255 pf10:1062641c|pf10_0247+pf10_0248 pf10_1:1062641c pf10_0247+pf10_0248 chr10_1.glm_302+303|01jun01 dm/vbc pf10_1:1062641c pf10_0247+pf10_0248 chr10_1.glm_302+303|01jun01 dm/vbc 13 4080 poly-a region separates gene 302+303 from gene 304+305+306+307 these genes may be dicistronic or alternatively spliced together 1062641 1062738 1062969 1064705 1064887 1065442 1065558 1065676 1065779 1065832 1065947 1066166 1066294 1066506 1066609 1066670 1066771 1066956 1067125 1067343 1067468 1067541 1067622 1067781 1067946 1068327 pf10 256 pf10:1068894c|pf10_0249+pf10_0250+pf10_0251 pf10_1:1068894c pf10_0249+pf10_0250+pf10_0251 chr10_1.glm_304+305+306+307|01jun01 vbc 11 17304 1068894 1068979 1069106 1069623 1069908 1070167 1070333 1070481 1070582 1073693 1073865 1074782 1074912 1077416 1077579 1077794 1077946 1080768 1081322 1087427 1087624 1088234 pf10 257 pf10:1089456w|pf10_0252|03oct02 pf10_1:1089456w pf10_0252|03oct02 tigr 1 204 1089456 1089659 pf10 258 pf10:1090173w|pf10_0253 pf10_1:1090173w pf10_0253 chr10_1.glm_309|01jun01 vbc 1 564 1090173 1090736 pf10 259 pf10:1091239c|bis pf10_1:1091239c bis pf10_0253 chr10_1.glm_310|01jun01 vbc 3 204 1091239 1091266 1091473 1091550 1091683 1091780 pf10 260 pf10:1092678c|pf10_0254c+pf10_0255c+pf10_025 pf10_1:1092678c pf10_0254c+pf10_0255c+pf10_0256c chr10_1.glm_311+312|01jun01 vbc 15 3996 1092678 1092713 1092891 1092929 1093083 1093190 1093299 1093370 1093553 1093591 1093692 1093943 1094036 1094101 1094201 1094239 1094364 1094693 1094798 1094942 1095045 1095139 1095230 1095295 1095388 1095483 1095658 1096029 1096279 1098519 pf10 261 pf10:1099697c|pf10_0257 pf10_1:1099697c pf10_0257 chr10_1.glm_313|01jun01 glm 2 1263 1099697 1099882 1100048 1101124 pf10 262 pf10:1103168w|pf10_0258 pf10_1:1103168w pf10_0258 chr10_1.glm_314+315|01jun01 vbc 5 477 1103168 1103253 1103510 1103612 1103739 1103819 1104098 1104158 1104255 1104400 pf10 263 pf10:1104706c|pf10_0259 pf10_1:1104706c pf10_0259 chr10_1.glm_316|01jun01 glm 1 1767 1104706 1106472 pf10 264 pf10:1106693.2w|pf10_0260 pf10_1:1106693.2w pf10_0260 chr10_1.glm_317|01jun01|alt2 vbc 2 24 1106693 1106705 1106969 1106979 pf10 265 pf10:1106734.1w|pf10_0260 pf10_1:1106734.1w pf10_0260 chr10_1.glm_317|01jun01|alt1 vbc 3 3540 1106734 1106786 1106969 1107057 1107296 1110693 pf10 266 pf10:1111036c|pf10_0261 pf10_1:1111036c pf10_0261 chr10_1.glm_318|01jun01 glm 1 1812 1111036 1112847 pf10 267 pf10:1114737c|pf10_0262 pf10_1:1114737c pf10_0262 chr10_1.glm_319|01jun01 glm 1 5079 1114737 1119815 pf10 268 pf10:1124204w|pf10_00264 pf10_1:1124204w pf10_00264 chr10_1.glm_321|01jun01 vbc 3 834 1124204 1124266 1124424 1124465 1124551 1125279 pf10 269 pf10:1126525w|bis pf10_1:1126525w bis pf10_0264 chr10_1.glm_321.1=gen_124=phat_239|01jun01 phat 1 885 1126525 1127409 pf10 270 pf10:1127765c|pf10_0265 pf10_1:1127765c pf10_0265 chr10_1.glm_322|01jun01 glm 1 5436 1127765 1133200 pf10 271 pf10:1135080c|pf10_0266 pf10_1:1135080c pf10_0266 chr10_1.glm_323|01jun01 glm 1 2319 1135080 1137398 pf10 272 pf10:1139187w|pf10_0267 pf10_1:1139187w pf10_0267 chr10_1.glm_324_chrblob2818.gen_1|01jun01 glm 1 1620 1139187 1140806 pf10 273 pf10:1141831c|pf10_0268 pf10_1:1141831c pf10_0268 chr10_1.glm_325|01jun01 glm 3 1182 1141831 1142748 1143144 1143388 1143826 1143844 pf10 274 pf10:1147065c|pf10_0269 pf10_1:1147065c pf10_0269 chr10_1.glm_326|01jun01 vbc 2 534 1147065 1147349 1147789 1148037 pf10 275 pf10:1149108w|pf10_0270 pf10_1:1149108w pf10_0270 chr10_1.glm_327 vbc 2 219 1149108 1149280 1149410 1149455 pf10 276 pf10:1149558c|bis pf10_1:1149558c bis pf10_0270chr10_1.glm_328+329=phat_244.2|01jun01 vbc 9 1023 1149558 1149929 1150111 1150203 1150291 1150415 1150515 1150598 1150691 1150710 1150783 1150886 1150962 1151002 1151121 1151261 1151368 1151410 pf10 277 pf10:1151905c|pf10_0271 pf10_1:1151905c pf10_0271 chr10_1.glm_329.1=phat244.2|01jun01 vbc 5 540 1151905 1152024 1152174 1152217 1152303 1152380 1152591 1152705 1152913 1153095 pf10 278 pf10:1154513c|pf10_0272 pf10_1:1154513c pf10_0272 chr10_1.glm_330|01jun01 glm 1 1161 1154513 1155673 pf10 279 pf10:1157890w|pf10_0273 pf10_1:1157890w pf10_0273 chr10_1.glm_331+332|01jun01 vbc 12 867 1157890 1157943 1158046 1158090 1158202 1158292 1158511 1158582 1158688 1158747 1158927 1158987 1159131 1159176 1159450 1159640 1159756 1159828 1159928 1159993 1160124 1160208 1160425 1160447 pf10 280 pf10:1161276w|pf10_0274 pf10_1:1161276w pf10_0274 chr10_1.glm_333|01jun01 vbc 13 1779 1161276 1161316 1161482 1161686 1161878 1162109 1162269 1162480 1162617 1162680 1162793 1162908 1163007 1163230 1163358 1163575 1163707 1163767 1163890 1163955 1164044 1164099 1164215 1164355 1164521 1164663 pf10 281 pf10:1165028w|pf10_0275 pf10_1:1165028w pf10_0275 chr10_1.glm_334|01jun01 glm 1 1830 1165028 1166857 pf10 282 pf10:1167288c|pf10_0276 pf10_1:1167288c pf10_0276 chr10_1.glm_335|01jun01 glm 1 825 1167288 1168112 pf10 283 pf10:1169252c|pf10_0277 pf10_1:1169252c pf10_0277 chr10_1.glm_336|01jun01 vbc 1 948 1169252 1170199 pf10 284 pf10:1171182w|pf10_0278 pf10_1:1171182w pf10_0278 chr10_1.glm_337|01jun01 glm 1 1452 1171182 1172633 pf10 285 pf10:1173275c|pf10_0279 pf10_1:1173275c pf10_0279 chr10_1.glm_338|01jun01 vbc 4 2535 1173275 1173361 1173440 1175777 1176003 1176081 1176209 1176239 pf10 286 pf10:1177703c|pf10_0280 pf10_1:1177703c pf10_0280 chr10_1.glm_339|01jun01 vbc 4 516 1177703 1177778 1177958 1178143 1178288 1178374 1178925 1179091 pf10 287 pf10:1182247w|pf10_0281 pf10_1:1182247w pf10_0281 chr10_1.glm_340|01jun01 glm 1 1497 1182247 1183743 pf10 288 pf10:1184729c|pf10_0282 pf10_1:1184729c pf10_0282 chr10_1.glm_341|01jun01 vbc 2 354 1184729 1184833 1184989 1185237 pf10 289 pf10:1185970c|pf10_0283 pf10_1:1185970c pf10_0283 chr10_1.glm_342|01jun01 vbc 2 1110 1185970 1186956 1187066 1187188 pf10 290 pf10:1188742c|bis pf10_1:1188742c bis pf10_0283 chr10_1.glm_343+344|01jun01 vbc pseudogene pseudogene 1 2029 1190362c [AT] | 1190282 [T] | 1190098 [TT] | 1190048 [A] | 1189651 [A] | 1189350 [TA] | 1188994 [T] 1188742 1190770 pf10 291 pf10:1191668w|pf10_0284 pf10_1:1191668w pf10_0284 chr10_1.glm_345|01jun01 vbc 4 4191 1191668 1195669 1195822 1195872 1196006 1196056 1196172 1196258 pf10 292 pf10:1196919w|pf10_0285 pf10_1:1196919w pf10_0285 chr10_1.glm_345.1=gen_133|01jun01 gen 1 1668 1196919 1198586 pf10 293 pf10:1199067c|pf10_0286 pf10_1:1199067c pf10_0286 chr10_1.glm_346|01jun01 glm 1 2208 1199067 1201274 pf10 294 pf10:1202136c|pf10_0287 pf10_1:1202136c pf10_0287 chr10_1.glm_347|01jun01 vbc 1 1506 1202136 1203641 pf10 295 pf10:1205588c|pf10_0288 pf10_1:1205588c pf10_0288 chr10_1.glm_348|01jun01 glm 1 417 1205588 1206004 pf10 296 pf10:1207559w|pf10_0289 pf10_1:1207559w pf10_0289 chr10_1.glm_349|01jun01 vbc 1 1089 1207559 1208647 pf10 297 pf10:1209440c|pf10_0290 pf10_1:1209440c pf10_0290 chr10_1.glm_350|01jun01 vbc 3 2331 ag site downstream 1209440 1211455 1211713 1211961 1212091 1212156 pf10 298 pf10:1212900c|pf10_0291 pf10_1:1212900c pf10_0291 chr10_1.glm_351|01jun01 glm 1 1314 1212900 1214213 pf10 299 pf10:1218590w|pf10_0292 pf10_1:1218590w pf10_0292 chr10_1.glm_352|01jun01 glm 1 5094 1218590 1223683 pf10 300 pf10:1224617w|pf10_0293|03oct02 pf10_1:1224617w pf10_0293|03oct02 tigr 4 402 1224617 1224632 1224769 1224823 1224962 1225061 1225179 1225409 pf10 301 pf10:1225761c|pf10_0294 pf10_1:1225761c pf10_0294 chr10_1.glm_353=gen_256=phat_260|01jun01 gen phat 4 3873 1225761 1227200 1227363 1227491 1227922 1227978 1228088 1230334 pf10 302 pf10:1231803c|pf10_0295 pf10_1:1231803c pf10_0295 chr10_1.glm_354|01jun01 glm 1 1353 1231803 1233155 pf10 303 pf10:1234909c|pf10_0296 pf10_1:1234909c pf10_0296 pf10_0296 chr10_1.glm_355|01jun01 glm 1 3336 1234909 1238244 pf10 304 pf10:1243009c|pf10_0297 pf10_1:1243009c pf10_0297 chr10_1.glm_357|01jun01 vbc 2 837 1243009 1243724 1244099 1244219 pf10 305 pf10:1245457w|pf10_0298 pf10_1:1245457w pf10_0298 chr10_1.glm_358|01jun01 glm 1 1182 1245457 1246638 pf10 306 pf10:1247122c|pf10_0299 pf10_1:1247122c pf10_0299 chr10_1.glm_359|01jun01 vbc 1 1785 1247122 1248906 pf10 307 pf10:1249775w|pf10_0300 pf10_1:1249775w pf10_0300 chr10_1.glm_360|01jun01 glm 1 774 1249775 1250548 pf10 308 pf10:1251287w|pf10_0301 pf10_1:1251287w pf10_0301 chr10_1.glm_360.1=gen_139|01jun01 gen 1 639 1251287 1251925 pf10 309 pf10:1252393c|pf10_0302 pf10_1:1252393c pf10_0302 chr10_1.glm_361|01jun01 vbc 1 657 1252393 1253049 pf10 310 pf10:1254659c|pf10_0303 pf10_1:1254659c pf10_0303 chr10_1.glm_362|01jun01 glm 1 654 1254659 1255312 pf10 311 pf10:1256085c|pf10_0304+pf10_0305 pf10_1:1256085c pf10_0304+pf10_0305 chr10_1.glm_363|01jun01 glm 2 555 1256085 1256508 1256698 1256828 pf10 312 pf10:1258626w|pf10_0306 pf10_1:1258626w pf10_0306 chr10_1.glm_364|01jun01 glm 1 1095 1258626 1259720 pf10 313 pf10:1261552w|pf10_0307 pf10_1:1261552w pf10_0307 chr10_1.glm_366|01jun01 glm 1 2760 1261552 1264311 pf10 314 pf10:1266321w|pf10_0308 pf10_1:1266321w pf10_0308 chr10_1.glm_367|01jun01 vbc 8 2838 1266321 1266404 1266542 1266589 1266671 1266811 1266956 1267035 1267153 1267216 1267308 1267403 1267517 1267594 1267781 1270027 pf10 315 pf10:1271770w|pf10_0309 pf10_1:1271770w pf10_0309 chr10_1.glm_370+371+372|01jun01 vbc 6 2754 1271770 1273358 1273512 1273800 1273904 1273975 1274138 1274467 1274658 1274831 1275087 1275386 pf10 316 pf10:1277105w|pf10_0310 pf10_1:1277105w pf10_0310 chr10_1.glm_373|01jun01 glm 1 2715 1277105 1279819 pf10 317 pf10:1282494w|pf10_0311 pf10_1:1282494w pf10_0311 chr10_1.glm_374|01jun01 vbc 4 351 tc binding site downstream 1282494 1282677 1282797 1282889 1283020 1283065 1283204 1283231 pf10 318 pf10:1283647c|pf10_0312 pf10_1:1283647c pf10_0312 chr10_1.glm_375|01jun01 vbc 3 1278 1283647 1284527 1284663 1284932 1285173 1285299 pf10 319 pf10:1285830c|pf10_0313 pf10_1:1285830c pf10_0313 chr10_1.glm_376|01jun01 vbc 5 1803 1285830 1286069 1286316 1287337 1287440 1287635 1287893 1288167 1288460 1288529 pf10 320 pf10:1288957c|bis pf10_1:1288957c bis pf10_0313 chr10_1.glm_377|01jun01 vbc 2 2211 1288957 1289065 1289186 1291287 pf10 321 pf10:1294741w|pf10_0314 pf10_1:1294741w pf10_0314 chr10_1.glm_378|01jun01 glm 1 3573 1294741 1298313 pf10 322 pf10:1299556c|bis pf10_1:1299556c bis pf10_0314 chr10_1.glm_379|01jun01 vbc 5 396 1299556 1299596 1299769 1299875 1299968 1300023 1300107 1300163 1300249 1300383 pf10 323 pf10:1301036w|pf10_0315 pf10_1:1301036w pf10_0315 chr10_1.glm_380|01jun01 glm 1 2616 1301036 1303651 pf10 324 pf10:1303836c|pf10_0316 pf10_1:1303836c pf10_0316 chr10_1.glm_381=gen_245|01jun01 vbc 7 1338 1303836 1303902 1304078 1304119 1304250 1304293 1304425 1304466 1304649 1305422 1305546 1305742 1305952 1306123 pf10 325 pf10:1307483c|pf10_0317|03oct02 pf10_1:1307483c pf10_0317|03oct02 tigr 3 792 1307483 1307688 1308062 1308289 1308417 1308774 pf10 326 pf10:1310115w|pf10_0318 pf10_1:1310115w pf10_0318 chr10_1.glm_384+chrblob_3227|01jun01 glm 1 1053 1310115 1311167 pf10 327 pf10:1311663c|pf10_0319 pf10_1:1311663c pf10_0319 chr10_1.glm_385+b3227|01jun01 glm 1 1662 1311663 1313324 pf10 328 pf10:1314497c|pf10_0320 pf10_1:1314497c pf10_0320 chr10_1.glm_386+387|03oct02 tigr/vbc /vbc 4 930 1314497 1315075 1315295 1315394 1315512 1315642 1315844 1315963 pf10 329 pf10:1316960c|bis0320 pf10_1:1316960c bis0320 bis0320 chr10_1.glm_388|01jun01 vbc 1 5232 1316960 1322191 pf10 330 pf10:1322753w|pf10_0321 pf10_1:1322753w pf10_0321 chr10_1.glm_389|01jun01 vbc 2 1725 1322753 1322788 1322933 1324621 pf10 331 pf10:1325374c|pf10_0322 pf10_1:1325374c pf10_0322 chr10_1.glm_390|01jun01 glm 1 4305 1325374 1329678 pf10 332 pf10:1336464w|pf10_0323 pf10_1:1336464w pf10_0323 chr10_1.glm_391|01jun01 glm qimr:ts etramps 10.2 etramps 10.2 1 1068 1336464 1337531 pf10 333 pf10:1339366c|pf10_0324 pf10_1:1339366c pf10_0324 chr10_1.glm_392|01jun01 vbc 3 369 1339366 1339484 1339626 1339687 1339873 1340060 pf10 334 pf10:1341004w|pf10_0325 pf10_1:1341004w pf10_0325 chr10_1.glm_393|01jun01 glm 1 867 1341004 1341870 pf10 335 pf10:1342888w|pf10_0326 pf10_1:1342888w pf10_0326 chr10_1.glm_394+b2971|01jun01 vbc 2 2151 1342888 1344997 1345127 1345167 pf10 336 pf10:1345392c|pf10_0327 pf10_1:1345392c pf10_0327 chr10_1.glm_395|01jun01 glm 1 2748 1345392 1348139 pf10 337 pf10:1349678w|pf10_0328 pf10_1:1349678w pf10_0328 chr10_1.glm_396|01jun01 vbc 3 1464 1349678 1350380 1350568 1350672 1350867 1351522 pf10 338 pf10:1352439w|pf10_0329 pf10_1:1352439w pf10_0329 chr10_1.glm_397|01jun01 vbc 8 1353 1352439 1352943 1353076 1353137 1353231 1353269 1353360 1353421 1353519 1353598 1353719 1353782 1353883 1353920 1354024 1354526 pf10 339 pf10:1355696c|pf10_0330 pf10_1:1355696c pf10_0330 chr10_1.glm_398|01jun01 vbc 5 576 1355696 1355844 1356061 1356189 1356291 1356458 1356577 1356656 1356764 1356813 pf10 340 pf10:1360559c|pf10_0331 pf10_1:1360559c pf10_0331 chr10_1.glm_400|01jun01 vbc 1 1992 1360559 1362550 pf10 341 pf10:1363390c|bis pf10_1:1363390c bis pf10_0331 chr10_1.glm_401+402|01jun01 vbc 5 456 1363390 1363489 1363591 1363655 1363777 1363812 1363874 1363935 1364118 1364310 pf10 342 pf10:1364715w|pf10_0332 pf10_1:1364715w pf10_0332 chr10_1.glm_403|01jun01 glm 1 645 1364715 1365359 pf10 343 pf10:1366340w|pf10_0333 pf10_1:1366340w pf10_0333 chr10_1.glm_404|01jun01 glm 1 1593 1366340 1367932 pf10 344 pf10:1368535c|pf10_0334 pf10_1:1368535c pf10_0334 chr10_1.glm_405+blob_3798|01jun01 glm d86573 d86573 1 1896 1368535 1370430 pf10 345 pf10:1371972w|pf10_0335 pf10_1:1371972w pf10_0335 chr10_1.glm_406|01jun01 vbc 8 4536 1371972 1372011 1372140 1376055 1376191 1376277 1376376 1376428 1376539 1376641 1376771 1376827 1376939 1377086 1377241 1377372 pf10 346 pf10:1378068c|pf10_0336 pf10_1:1378068c pf10_0336 chr10_1.glm_407|01jun01 glm 1 933 1378068 1379000 pf10 347 pf10:1380000w|pf10_0337 pf10_1:1380000w pf10_0337 chr10_1.glm_408|01jun01 glm 1 537 1380000 1380536 pf10 348 pf10:1381269w|pf10_0338+pf10_0339 pf10_1:1381269w pf10_0338+pf10_0339 chr10_1.glm_409|01jun01 vbc 11 981 1381269 1381321 1381461 1381568 1381685 1381829 1381922 1382055 1382154 1382241 1382339 1382402 1382492 1382541 1382660 1382710 1382822 1382934 1383068 1383160 1383299 1383380 pf10 349 pf10:1384694w|chr10_1.glm_410|01jun01 pf10_1:1384694w chr10_1.glm_410|01jun01 vbc 1 2667 1384694 1387360 pf10 350 pf10:1387890c|pf10_0341 pf10_1:1387890c pf10_0341 chr10_1.glm_411|01jun01 glm 1 2982 1387890 1390871 pf10 351 pf10:1392686w|pf10_0342 pf10_1:1392686w pf10_0342 chr10_1.glm_412|01jun01 glm 1 1686 1392686 1394371 pf10 352 pf10:1396080w|pf10_0343 pf10_1:1396080w pf10_0343 chr10_1.glm_413|01jun01 glm 1 1758 1396080 1397837 pf10 353 pf10:1400436w|pf10_0344 pf10_1:1400436w pf10_0344 chr10_1.glm_414|01jun01 glm glurp af247634 glurp af247634 1 3702 1400436 1404137 pf10 354 pf10:1405436w|pf10_0345 pf10_1:1405436w pf10_0345 chr10_1.glm_415|01jun01 glm 1 1065 1405436 1406500 pf10 355 pf10:1408517w|pf10_0346 pf10_1:1408517w pf10_0346 chr10_1.glm_416|01jun01 vbc 1 1116 1408517 1409632 pf10 356 pf10:1410522w|pf10_0347 pf10_1:1410522w pf10_0347 chr10_1.glm_417|01jun01 glm 1 1275 1410522 1411796 pf10 357 pf10:1414441w|pf10_0348 pf10_1:1414441w pf10_0348 chr10_1.glm_418+b3045|01jun01 glm 1 2094 1414441 1416534 pf10 358 pf10:1421774w|pf10_0350 pf10_1:1421774w pf10_0350 chr10_1.glm_419|01jun01 glm 1 2139 1421774 1423912 pf10 359 pf10:1425224w|pf10_0351 pf10_1:1425224w pf10_0351 chr10_1.glm_420|01jun01 glm 1 1701 1425224 1426924 pf10 360 pf10:1428368w|pf10_0352 pf10_1:1428368w pf10_0352 chr10_1.glm_421|01jun01 glm 1 1218 1428368 1429585 pf10 361 pf10:1430766w|pf10_0353+pf10_0354 pf10_1:1430766w pf10_0353+pf10_0354 chr10_1.glm_421.1|01jun01 vbc pseudogene pseudogene 1 928 1430934w [T] | 1431603 [AT] | 1431650 [AA] 1430766 1431693 pf10 362 pf10:1433739w|pf10_0355 pf10_1:1433739w pf10_0355 chr10_1.glm_422|01jun01 glm 1 2289 1433739 1436027 pf10 363 pf10:1437557w|pf10_0356 pf10_1:1437557w pf10_0356 chr10_1.glm_423+blob_3722|01jun01 vbc liver stage antigen lsa1 liver stage antigen lsa1 1 4825 frameshift near 1439277 repeat region period 51 inside lsa-1 gene ser-gly5 repeat region in chr 12 pfemp1 var 1718814 to 1726696 1439299w [G] 1437557 1442381 pf10 364 pf10:1444196w|pf10_0357 pf10_1:1444196w pf10_0357 chr10_1.glm_424|01jun01 vbc 1 1950 pseudogene or sequence error 1444196 1446145 pf10 365 pf10:1447018w|pf10_0358 pf10_1:1447018w pf10_0358 chr10_1.glm_425|01jun01 vbc 3 663 1447018 1447127 1447335 1447542 1447762 1448106 pf10 366 pf10:1448493c|pf10_0359 pf10_1:1448493c pf10_0359 chr10_1.glm_426=gen_231|01jun01 dm/vbc pf10_1:1448493c pf10_0359 chr10_1.glm_426=gen_231|01jun01 dm/vbc 8 633 1448493 1448522 1448716 1448783 1448883 1449004 1449122 1449219 1449301 1449387 1449500 1449564 1449742 1449856 1450025 1450072 pf10 367 pf10:1451195c|pf10_0360 pf10_1:1451195c pf10_0360 chr10_1.glm_427+428|01jun01 vbc 9 1869 1451195 1451319 1451503 1451586 1451666 1451723 1451877 1451963 1452126 1453065 1453229 1453413 1453527 1453653 1453760 1453859 1454061 1454223 pf10 368 pf10:1455160c|pf10_0361 pf10_1:1455160c pf10_0361 chr10_1.glm_429+b3149|03oct02 tigr/vbc /vbc 3 5028 1455160 1455189 1455383 1455573 1455777 1460583 pf10 369 pf10:1464928w|pf10_0362 pf10_1:1464928w pf10_0362 chr10_1.glm_430|01jun01 vbc 4 6681 1464928 1465023 1465210 1465308 1465441 1465486 1465693 1472132 pf10 370 pf10:1472567c|pf10_0363 pf10_1:1472567c pf10_0363 chr10_1.glm_431|01jun01 glm 1 2238 1472567 1474804 pf10 371 pf10:1476091w|pf10_0364+pf10_0365 pf10_1:1476091w pf10_0364+pf10_0365 chr10_1.glm_432+433|01jun01 vbc 12 2166 1476091 1476326 1476423 1476537 1476636 1476737 1476825 1477033 1477127 1477263 1477363 1477469 1477525 1477626 1477734 1477839 1477960 1478175 1478309 1478610 1478743 1479020 1479182 1479437 pf10 372 pf10:1480517c|pf10_0366 pf10_1:1480517c pf10_0366 chr10_1.glm_434|01jun01 glm 1 906 1480517 1481422 pf10 373 pf10:1484340c|pf10_0367 pf10_1:1484340c pf10_0367 chr10_1.glm_435|01jun01 glm 1 3591 1484340 1487930 pf10 374 pf10:1490536w|pf10_0368 pf10_1:1490536w pf10_0368 chr10_1.glm_436|01jun01 glm 1 2130 1490536 1492665 pf10 375 pf10:1493994w|pf10_0369 pf10_1:1493994w pf10_0369 chr10_1.glm_437|01jun01 vbc 3 2658 1493994 1494133 1494311 1495080 1495208 1496955 pf10 376 pf10:1498550w|pf10_0370 pf10_1:1498550w pf10_0370 chr10_1.glm_437.1=gen_177|01jun01 gen 3 318 1498550 1498652 1498818 1498938 1499142 1499235 pf10 377 pf10:1499673c|pf10_0371 pf10_1:1499673c pf10_0371 chr10_1.glm_438+439+440+441|01jun01 vbc 17 2880 1499673 1499771 1499912 1499947 1500039 1500185 1500277 1500368 1500566 1500882 1500993 1501126 1501288 1501371 1501483 1501532 1501745 1501891 1502007 1502174 1502277 1502337 1502463 1502531 1502617 1503135 1503334 1503618 1503749 1503844 1503966 1504176 1504368 1504732 pf10 378 pf10:1505532c|bis pf10_1:1505532c bis pf10_0371 chr10_1.glm_442|01jun01 vbc 5 606 1505532 1505699 1505827 1505852 1506012 1506093 1506281 1506400 1506750 1506959 pf10 379 pf10:1508412w|pf10_0372 pf10_1:1508412w pf10_0372 chr10_1.glm_443|03oct02 tigr 4 363 1508412 1508448 1508866 1509005 1509124 1509191 1509356 1509473 pf10 380 pf10:1510159c|pf10_0373 pf10_1:1510159c pf10_0373 chr10_1.glm_444|01jun01 glm 1 2943 1510159 1513101 pf10 381 pf10:1513919w|bis pf10_1:1513919w bis pf10_0373 chr10_1.glm_445|01jun01 glm 2 237 1513919 1514042 1514300 1514412 pf10 382 pf10:1514767c|tris pf10_1:1514767c tris pf10_0373 chr10_1.glm_446|01jun01 vbc 8 990 1514767 1514857 1515050 1515162 1515290 1515395 1515558 1515670 1516047 1516391 1516508 1516606 1516736 1516816 1516952 1516993 pf10 383 pf10:1521598w|pf10_0374 pf10_1:1521598w pf10_0374 chr10_1.gen_328|24oct01 vbc pf11.1 pf11.1 2 32904 frameshifts @ 1547472 and 1552073 related to pf332 and resa 1547451w [GA] | 1552073 [C] 1521598 1521810 1521924 1554614 pf10 384 pf10:1555244c|pf10_0375 pf10_1:1555244c pf10_0375 chr10_1.glm_449|01jun01 vbc 2 1125 1555244 1556158 1556311 1556520 pf10 385 pf10:1558286c|pf10_0376 pf10_1:1558286c pf10_0376 chr10_1.glm_450|01jun01 glm 2 1557 1558286 1559638 1559758 1559961 pf10 386 pf10:1561318c|pf10_0377 pf10_1:1561318c pf10_0377 chr10_1.glm_451|01jun01 vbc 2 1083 1561318 1562190 1562282 1562491 pf10 387 pf10:1564605w|pf10_0378 pf10_1:1564605w pf10_0378 chr10_1.glm_452|01jun01 vbc 2 2736 1564605 1564802 1564948 1567485 pf10 388 pf10:1569598w|pf10_0379 pf10_1:1569598w pf10_0379 chr10_1.glm_453|01jun01 vbc 1 1080 1569598 1570677 pf10 389 pf10:1575498w|pf10_0380 pf10_1:1575498w pf10_0380 chr10_1.glm_454|01jun01 glm 3 2742 1575498 1575698 1575849 1578308 1578524 1578604 pf10 390 pf10:1580849w|pf10_0381+pf10_0382 pf10_1:1580849w pf10_0381+pf10_0382 chr10_1.glm_455+456|01jun01 vbc 2 1701 cf chr11:102973c pf11_0034 read tga @ 1582210; chr11 has tgg 1580849 1581037 1581226 1582737 pf10 391 pf10:1593941c|pf10_0384+pf10_0385+pf10_0386+ pf10_1:1593941c pf10_0384+pf10_0385+pf10_0386+pf10_0387 chr10_1.glm_458+459+460|01jun01 vbc pseudogene var-c fragment pseudogene var-c fragment 1 1347 aligns with pf2:873767c pfb0975c pseudogene var-c fragment central region aligns with c10:60022w pf10_0011+0012w var-c pseudogene c10:6022w pf10_0011+0012w aligns with pfa0755w var-c pseudogene at front 1595017c [AA] | 1594802 [A] | 1594612 [GA] | 1594568 [GA] | 1594371 [GA] 1593941 1595287 pf10 392 pf10:1596379w|pf10_0388+pf10_0389 pf10_1:1596379w pf10_0388+pf10_0389 pf10_1:1596379w pf10_0388+pf10_0389 2 1228 " cf pf11:87046c pf11_0026 chimera chr1, model chr2, cf chr3, chr6, chr7, chr10, chr11 ""pfb0980"" " 1596394w [TTAT] | 1596641 [AA] | 1596808 [AG] | 1596819 [GT] 1596379 1596436 1596593 1597762 pf10 393 pf10:1598367c|pf10_0390 pf10_1:1598367c pf10_0390 chr10_1.glm_464|01jun01 vbc stevor stevor 2 696 1598367 1598993 1599088 1599156 pf10 394 pf10:1601292c|pf10_0391 pf10_1:1601292c pf10_0391 chr10_1.glm_465|01jun01 vbc stevor stevor 2 693 1601292 1601915 1601998 1602066 pf10 395 pf10:1603276w|pf10_0392 pf10_1:1603276w pf10_0392 chr10_1.glm_466|01jun01 vbc stevor stevor 2 927 " cf pf11:80309c pf11_0023 alignments e n d @ chr1 555519, chr2 884310, chr3 1010134 alignments e n d @ chr10 160394, chr11 80309, blob_4251 270 " 1603276 1603344 1603537 1604394 pf10 396 pf10:1606689w|pf10_0393 pf10_1:1606689w pf10_0393 chr10_1.glm_467|01jun01 glm stevor stevor 2 1080 cf pf11:76820c pf11_0022 24aa's alignment blob_4151 2609 1606689 1606760 1606859 1607866 pf10 397 pf10:1609724w|pf10_0394 pf10_1:1609724w pf10_0394 chr10_1.glm_468|01jun01 glm stevor stevor 2 930 1609724 1609792 1609918 1610778 pf10 398 pf10:1612719w|pf10_0395 pf10_1:1612719w pf10_0395 chr10_1.glm_469|01jun01 vbc stevor stevor 2 918 1612719 1612787 1612894 1613742 pf10 399 pf10:1615852w|pf10_0396 pf10_1:1615852w pf10_0396 chr10_1.glm_470|01jun01 vbc stevor stevor 2 1137 1615852 1615920 1616144 1617211 pf10 400 pf10:1619319w|pf10_0397 pf10_1:1619319w pf10_0397 chr10_1.glm_471|01jun01 glm stevor stevor 2 1047 1619319 1619387 1619547 1620524 pf10 401 pf10:1622593w|pf10_0398 pf10_1:1622593w pf10_0398 chr10_1.glm_472|01jun01 glm rifin rifin 2 1053 1622593 1622646 1622861 1623859 pf10 402 pf10:1625875w|pf10_0399 pf10_1:1625875w pf10_0399 chr10_1.glm_473|01jun01 glm stevor stevor 2 981 1625875 1625943 1626122 1627033 pf10 403 pf10:1629157w|pf10_0400 pf10_1:1629157w pf10_0400 chr10_1.glm_474|01jun01 glm rifin rifin 2 1119 1629157 1629210 1629409 1630473 pf10 404 pf10:1632561w|pf10_0401 pf10_1:1632561w pf10_0401 chr10_1.glm_475|01jun01 glm rifin rifin 2 888 1632561 1632614 1632780 1633613 pf10 405 pf10:1635703w|pf10_0402 pf10_1:1635703w pf10_0402 chr10_1.glm_476|01jun01 glm stevor stevor 2 936 1635703 1635771 1635946 1636812 pf10 406 pf10:1639187.1w|pf10_0403 pf10_1:1639187.1w pf10_0403 chr10_1.glm_477|01jun01|alt1 glm rifin rifin 2 1113 1639187 1639240 1639396 1640454 pf10 407 pf10:1639187.2w|pf10_0403 pf10_1:1639187.2w pf10_0403 chr10_1.glm_477|01jun01|alt2 vbc stevor stevor 2 1125 22 aa's 1639187 1639252 1639396 1640454 pf10 408 pf10:1642385.2w|pf10_0404 pf10_1:1642385.2w pf10_0404 chr10_1.glm_478|01jun01|alt2 glm stevor stevor 2 1020 alignment of aca tca codons 20 & 21 in stevors 1642385 1642453 1642618 1643568 pf10 409 pf10:1642385.1w|pf10_0404 pf10_1:1642385.1w pf10_0404 chr10_1.glm_478|01jun01|alt1 vbc rifin rifin 2 1005 poly-a supports stevor splice; poly-ry supports rifin splice 1642385 1642438 1642618 1643568 pf10 410 pf10:1645960w|pf10_0405 pf10_1:1645960w pf10_0405 chr10_1.glm_479|01jun01 glm rifin rifin 2 1116 1645960 1646013 1646246 1647307 pf10 411 pf10:1649190c|pf10_0406 pf10_1:1649190c pf10_0406 chr10_1.glm_480+481|01jun01 vbc pfemp1 var pfemp1 var 2 6585 1649190 1650425 1651389 1656737