record GenBank ID history name product exons length notes frameshift 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 pf6 1 pf6_1:34190w|mal6p1.1 pf6_1:34190wp mal6p1.1 chr6_0040.glm_1+2|24oct01 vbc pfemp1 var pfemp1 var 2 6717 partial gene in chr6_0052.glm_3|24oct01 vbc pfemp1 var fragment 34190 39466 40581 42020 pf6 2 pf6_1:43956c|olim pf6_1:43956c olim mal6p1.2 chrblob_4059.glm_1|24oct01 glm rifin rifin 2 1131 43956 45032 45263 45316 pf6 3 pf6_1:47710.1c|mal6p1.3 pf6_1:47710.1c mal6p1.3 chr6_0090.glm_3+4|24oct01|alt1 vbc rifin rifin 2 1035 47710 48690 48852 48905 pf6 4 pf6_1:47710.2c|mal6p1.3 pf6_1:47710.2c mal6p1.3 chr6_0090.glm_3+4|24oct01|alt2 vbc stevor stevor 2 1050 47710 48690 48837 48905 pf6 5 pf6_1:50387w|olim pf6_1:50387w olim mal6p1.4 chr6_0090.glm_5|24oct01 vbc pfemp1 var pfemp1 var 2 11865 50387 60772 61394 62872 pf6 6 pf6_1:64729c|olim pf6_1:64729c olim mal6p1.5 chrblob_4166.glm_2|24oct01 glm rifin rifin 2 1134 64729 65808 66039 66092 pf6 7 pf6_1:68245c|olim pf6_1:68245c olim mal6p1.6 chr6_0065.glm_2|24oct01 glm stevor stevor 2 1080 68245 69255 69407 69475 pf6 8 pf6_1:71161c|bis pf6_1:71161c bis olim_mal6p1.6 chr6_0065.glm_1.1|24oct01 vbc rifin pseudogene rifin pseudogene 2 417 " similar to but not the same as chr6_0052.glm_8.1 vbc (bin) subtelomeric copy chr1, 2, 3, 4, 6, 7a, 7b, 9a, 9b, 10, 11, 12, 13, 14 group 1 = pf7_2:35640c, pf9_1:36430c " 71161 71523 71741 71794 pf6 9 pf6_1:74221w|olim pf6_1:74221w olim mal6p1.7 chrblob_4252.glm_1|24oct01 glm rifin rifin 2 1134 74221 74274 74430 75509 pf6 10 pf6_1:77399w|olim pf6_1:77399w olim mal6p1.8 chrblob_4252.glm_2|24oct01 glm rifin rifin 2 972 77399 77452 77681 78598 pf6 11 pf6_1:79343c|olim pf6_1:79343c olim mal6p1.9 chrblob_4252.glm_3|24oct01 vbc rifin rifin 2 1113 79343 80401 80617 80670 pf6 12 pf6_1:82781c|mal6p1.10 pf6_1:82781c mal6p1.10 chrblob_4252.glm_4|24oct01 glm stevor stevor 2 912 82781 83623 83735 83803 pf6 13 pf6_1:85853c|mal6p1.11 pf6_1:85853c mal6p1.11 chrblob_4252.glm_5|24oct01 glm rifin rifin 2 1029 85853 86827 86992 87045 pf6 14 pf6_1:88872c|mal6p1.12 pf6_1:88872c mal6p1.12 chrblob_4251.glm_1|24oct01 vbc stevor pseudogene stevor pseudogene 2 1110 24 aa's 88872 89909 90008 90079 pf6 15 pf6_1:92381c|mal6p1.13 pf6_1:92381c mal6p1.13 chrblob_4187.glm_1.1|24oct01 vbc stevor stevor 2 930 92381 93241 93454 93522 pf6 16 pf6_1:94723w|mal6p1.14 pf6_1:94723w mal6p1.14 chrblob_4187.glm_1|24oct01 vbc stevor pfb0990c stevor pfb0990c 2 693 94723 94791 94874 95497 pf6 17 pf6_1:97701w|mal6p1.15 pf6_1:97701w mal6p1.15 chrblob_0075.glm_1|24oct01 vbc stevor pfb0985c stevor pfb0985c 2 696 97701 97769 97864 98490 pf6 18 pf6_1:99096c|mal6p1.16 pf6_1:99096c mal6p1.16 chrblob_0075.glm_2|24oct01 vbc pfb0980 rifin pseudogene pfb0980 rifin pseudogene 2 1242 " chimera chr1, model chr2, cf chr3, chr6, chr7, chr10, chr11 ""pfb0980"" " 100478c [TTAT] | 100060 [GT] 99096 100279 100436 100493 pf6 19 pf6_1:101581w|mal6p1.17+mal6p1.18 pf6_1:101581w mal6p1.17+mal6p1.18 chr6_0039.glm_1|24oct01 vbc pseudogene var-c fragment pseudogene var-c fragment 1 1346 aligns with pf2:873767c pfb0975c pseudogene var-c fragment central region aligns with c10:60022w pf10_0011+0012w var-c pseudogene c10:6022w pf10_0011+0012w aligns with pfa0755w var-c pseudogene at front 101668w [G] | 102058 [A] | 102318 [T] | 102517 [AT] 101581 102926 pf6 20 pf6_1:115786c|mal6p1.19 pf6_1:115786c mal6p1.19 chr8_170.glm_2|24oct01 glm 2 1356 115786 117105 117358 117393 pf6 21 pf6_1:118831c|mal6p1.20 pf6_1:118831c mal6p1.20 chr6_0050.glm_1|24oct01 vbc 1 861 118831 119691 pf6 22 pf6_1:121000w|mal6p1.21 pf6_1:121000w mal6p1.21 chr6_0050.glm_2|24oct01 vbc stevor pseudogene stevor pseudogene 2 816 121000 121077 121196 121933 pf6 23 pf6_1:124264w|bis pf6_1:124264w bis mal6p1.21 chr6_0050.glm_3|24oct01 glm pseudogene pseudogene 1 225 " cf alignments on c1: c1:586353c, c6:124264w & c8:1257205c c8 is the active gene; c1 & c6 are pseudogenes " 124264 124488 pf6 24 pf6_1:128187w|mal6p1.22|03oct02 pf6_1:128187w mal6p1.22|03oct02 sanger 2 387 128187 128375 128584 128781 pf6 25 pf6_1:132606c|mal6p1.23 pf6_1:132606c mal6p1.23 chr6_0097.glm_1|24oct01 glm 1 4314 132606 136919 pf6 26 pf6_1:142502w|mal6p1.24 pf6_1:142502w mal6p1.24 chr6_0038.glm_1|24oct01 glm 2 4053 142502 146418 146529 146664 pf6 27 pf6_1:147886w|mal6p1.25 pf6_1:147886w mal6p1.25 chr6_0011.glm_6+7|24oct01 vbc 3 759 147886 148424 148620 148737 148846 148947 pf6 28 pf6_1:149917w|mal6p1.26 pf6_1:149917w mal6p1.26 chr6_0011.glm_5|24oct01 vbc 1 804 149917 150720 pf6 29 pf6_1:151380c|mal6p1.27 pf6_1:151380c mal6p1.27 chr6_0011.glm_4|24oct01 vbc 4 2814 151380 151459 151597 151689 151815 151902 152004 154556 pf6 30 pf6_1:155498w|mal6p1.28 pf6_1:155498w mal6p1.28 chr6_0011.glm_3|24oct01 vbc 1 1140 155498 156637 pf6 31 pf6_1:157032c|mal6p1.29 pf6_1:157032c mal6p1.29 chr6_0011.glm_1+2|03oct02 sanger 5 3894 157032 157221 157577 158055 158158 158421 158561 158913 159052 161659 pf6 32 pf6_1:163818c|mal6p1.30 pf6_1:163818c mal6p1.30 chr6_0072.glm_3|24oct01 glm 1 1401 163818 165218 pf6 33 pf6_1:166078w|mal6p1.31 pf6_1:166078w mal6p1.31 chr6_0072.glm_2|24oct01 glm 1 1941 166078 168018 pf6 34 pf6_1:168632c|mal6p1.32 pf6_1:168632c mal6p1.32 chr6_0072.glm_1|24oct01 glm 2 1413 168632 169064 169218 170197 pf6 35 pf6_1:172629w|mal6p1.33 pf6_1:172629w mal6p1.33 chr6_0055.glm_1|24oct01 glm 1 1779 172629 174407 pf6 36 pf6_1:175453c|mal6p1.34 pf6_1:175453c mal6p1.34 chr6_0055.glm_2|24oct01 glm 1 1359 175453 176811 pf6 37 pf6_1:178616w|mal6p1.35 pf6_1:178616w mal6p1.35 chr6_0055.glm_3|24oct01 glm 1 1416 178616 180031 pf6 38 pf6_1:180324c|mal6p1.36 pf6_1:180324c mal6p1.36 chr6_0055.glm_4|24oct01 glm 1 1710 180324 182033 pf6 39 pf6_1:183145c|mal6p1.37 pf6_1:183145c mal6p1.37 chr6_0088.glm_1|24oct01 vbc 1 3312 183145 186456 pf6 40 pf6_1:189188w|mal6p1.38 pf6_1:189188w mal6p1.38 chr6_0088.glm_2|24oct01 glm 1 1326 189188 190513 pf6 41 pf6_1:191413c|mal6p1.39 pf6_1:191413c mal6p1.39 chr6_0088.glm_3|24oct01 vbc 3 7107 191413 191565 191827 196683 196842 198938 pf6 42 pf6_1:201050w|mal6p1.40 pf6_1:201050w mal6p1.40 chr6_0088.glm_4|24oct01 glm 1 1332 201050 202381 pf6 43 pf6_1:202536c|mal6p1.41 pf6_1:202536c mal6p1.41 chr6_0088.glm_5+6+7+8|24oct01 vbc 20 5481 202536 202598 202716 202879 203001 203091 203190 203438 203645 205388 205597 206326 206421 206594 206694 206791 206872 206943 207110 207287 207389 207530 207660 208011 208159 208350 208458 208555 208685 208936 209040 209263 209371 209465 209567 209703 209862 209996 210160 210450 pf6 44 pf6_1:211249c|mal6p1.42 pf6_1:211249c mal6p1.42 chr6_0088.glm_9|24oct01 glm 1 1128 211249 212376 pf6 45 pf6_1:213823c|mal6p1.43 pf6_1:213823c mal6p1.43 chr6_0088.glm_10|24oct01 glm 1 6033 213823 219855 pf6 46 pf6_1:221296c|mal6p1.44 pf6_1:221296c mal6p1.44 chr6_0088.glm_11|24oct01 glm 1 5940 221296 227235 pf6 47 pf6_1:230722w|mal6p1.45 pf6_1:230722w mal6p1.45 chr6_0088.glm_12.1=gen_8|24oct01 vbc 4 303 may initiate @ 230931 230722 230750 230939 231066 231189 231253 231396 231476 pf6 48 pf6_1:232217w|mal6p1.46 pf6_1:232217w mal6p1.46 chr6_0088.glm_13|24oct01 vbc 1 2316 232217 234532 pf6 49 pf6_1:234887w|mal6p1.47 pf6_1:234887w mal6p1.47 chr6_0088.glm_14|24oct01 glm 4 537 234887 235239 235408 235484 235608 235673 235798 235838 pf6 50 pf6_1:239007w|mal6p1.48 pf6_1:239007w mal6p1.48 chr6_0070.glm_23|24oct01 vbc 4 8625 239007 247380 247542 247586 247740 247813 247942 248073 pf6 51 pf6_1:248857w|mal6p1.49 pf6_1:248857w mal6p1.49 chr6_0070.glm_21+22|24oct01 vbc 3 5160 248857 251216 251572 254314 254560 254616 pf6 52 pf6_1:254635c|mal6p1.50 pf6_1:254635c mal6p1.50 chr6_0070.glm_20|24oct01 vbc 6 924 254635 254799 254971 255102 255223 255288 255399 255497 255599 255727 255870 256202 pf6 53 pf6_1:256850c|mal6p1.51 pf6_1:256850c mal6p1.51 chr6_0070.glm_19|24oct01 glm 1 4311 256850 261160 pf6 54 pf6_1:261372w|bis pf6_1:261372w bis mal6p1.51 chr6_0070.glm_18.1|24oct01 vbc 1 273 261372 261644 pf6 55 pf6_1:262410c|mal6p1.52 pf6_1:262410c mal6p1.52 chr6_0070.glm_18|24oct01 vbc 3 300 262410 262467 262613 262794 262980 263039 pf6 56 pf6_1:263553w|mal6p1.53 pf6_1:263553w mal6p1.53 chr6_0070.glm_17|24oct01 glm 1 585 263553 264137 pf6 57 pf6_1:267235w|mal6p1.54 pf6_1:267235w mal6p1.54 chr6_0070.glm_16|24oct01 glm 1 2268 267235 269502 pf6 58 pf6_1:270402c|mal6p1.55 pf6_1:270402c mal6p1.55 chr6_0070.glm_15|24oct01 vbc 6 630 270402 270440 270573 270633 270737 270864 271005 271102 271220 271346 271632 271808 pf6 59 pf6_1:272731w|mal6p1.56 pf6_1:272731w mal6p1.56 chr6_0070.glm_12|03oct02 sanger 4 1065 272731 272847 273045 273139 273303 273374 273502 274282 pf6 60 pf6_1:274608c|mal6p1.57 pf6_1:274608c mal6p1.57 chr6_0070.glm_11|24oct01 glm 1 483 274608 275090 pf6 61 pf6_1:275341c|mal6p1.58 pf6_1:275341c mal6p1.58 chr6_0070.glm_10|03oct02 sanger 2 1824 275341 275406 275684 277441 pf6 62 pf6_1:278127c|mal6p1.59 pf6_1:278127c mal6p1.59 chr6_0070.glm_6+7+9|24oct01 vbc 7 5487 278127 282818 283058 283200 283308 283356 283470 283749 284075 284265 284575 284649 284774 284830 pf6 63 pf6_1:286392w|mal6p1.60 pf6_1:286392w mal6p1.60 chr6_0070.glm_5|24oct01 glm 1 855 286392 287246 pf6 64 pf6_1:287806c|mal6p1.61 pf6_1:287806c mal6p1.61 chr6_0070.glm_4|24oct01 glm 1 6711 287806 294516 pf6 65 pf6_1:297635w|mal6p1.62 pf6_1:297635w mal6p1.62 chr6_0070.glm_2+3|24oct01 vbc 6 741 (ry)2+(yr)5 297635 297687 297829 297949 298072 298199 298331 298495 298726 298831 298994 299161 pf6 66 pf6_1:300607c|mal6p1.63 pf6_1:300607c mal6p1.63 chr6_0070.glm_1|24oct01 glm 1 3192 300607 303798 pf6 67 pf6_1:307598w|mal6p1.64 pf6_1:307598w mal6p1.64 chr6_0069.glm_6+7|24oct01 vbc 5 1776 307598 307722 307854 307880 308091 308313 308390 308533 308712 309968 pf6 68 pf6_1:311025c|mal6p1.65 pf6_1:311025c mal6p1.65 chr6_0069.glm_4+5|03oct02 sanger 4 468 311025 311245 311382 311490 311608 311668 311863 311939 pf6 69 pf6_1:312820w|mal6p1.66 pf6_1:312820w mal6p1.66 chr6_0069.glm_3.1=gen_6|24oct01 gen 1 369 312820 313188 pf6 70 pf6_1:313930c|mal6p1.67|03oct02 pf6_1:313930c mal6p1.67|03oct02 sanger 5 375 313930 314001 314120 314181 314298 314436 314578 314626 314769 314821 pf6 71 pf6_1:315833c|mal6p1.68 pf6_1:315833c mal6p1.68 chr6_0069.glm_3|24oct01 vbc 5 1992 315833 315919 316039 316242 316392 316649 316801 316937 317088 318393 pf6 72 pf6_1:320325c|mal6p1.69 pf6_1:320325c mal6p1.69 chr6_0069.glm_2|24oct01 glm 2 7245 320325 320364 320551 327755 pf6 73 pf6_1:332042w|mal6p1.70 pf6_1:332042w mal6p1.70 chr6_0026.glm_9|24oct01 vbc 4 4566 also chrblob_4033.glm_1|24oct01 vbc 332042 336256 336428 336596 336731 336876 336975 337010 pf6 74 pf6_1:338370c|mal6p1.71 pf6_1:338370c mal6p1.71 chr6_0026.glm_8|24oct01 vbc 1 897 338370 339266 pf6 75 pf6_1:340419c|mal6p1.72 pf6_1:340419c mal6p1.72 chr6_0026.glm_7|24oct01 glm 1 660 340419 341078 pf6 76 pf6_1:343857w|mal6p1.73 pf6_1:343857w mal6p1.73 chr6_0026.glm_6|24oct01 glm 1 2934 343857 346790 pf6 77 pf6_1:347932w|mal6p1.74 pf6_1:347932w mal6p1.74 chr6_0026.glm_3+4+5|03oct02 sanger 16 1419 347932 348011 348108 348216 348355 348522 348638 348771 348872 348923 349020 349158 349278 349353 349438 349483 349633 349682 349794 349833 350029 350100 350267 350329 350453 350606 350724 350854 350927 350983 351141 351188 pf6 78 pf6_1:351865c|mal6p1.75 pf6_1:351865c mal6p1.75 chr6_0026.glm_1+2|24oct01 vbc 2 1290 351865 353120 353248 353281 pf6 79 pf6_1:354629w|mal6p1.76 pf6_1:354629w mal6p1.76 chr6_0013.glm_1|24oct01 vbc 2 1242 downstream ag site 354629 354797 354961 356033 pf6 80 pf6_1:356375c|mal6p1.77 pf6_1:356375c mal6p1.77 chr6_0045.glm_3|03oct02 sanger/vbc /vbc 14 1794 356375 356407 356511 356576 356721 356783 356870 356926 357041 357101 357224 357358 357515 357604 357713 357785 358032 358069 358166 358273 358416 358462 358571 358682 358824 359149 359368 359952 pf6 81 pf6_1:361541w|mal6p1.78 pf6_1:361541w mal6p1.78 chr6_0045.glm_2|24oct01 glm 1 1566 361541 363106 pf6 82 pf6_1:363847c|mal6p1.79 pf6_1:363847c mal6p1.79 chr6_0045.glm_1|24oct01 vbc 5 2586 363847 363899 364023 364069 364161 364275 364400 364495 364599 366873 pf6 83 pf6_1:370731w|mal6p1.80 pf6_1:370731w mal6p1.80 chr6_0089.glm_3|24oct01 glm 1 8259 370731 378989 pf6 84 pf6_1:379528c|mal6p1.81 pf6_1:379528c mal6p1.81 chr6_0089.glm_2|24oct01 glm 2 2025 379528 379780 379945 381716 pf6 85 pf6_1:382334w|mal6p1.82 pf6_1:382334w mal6p1.82 chr6_0089.glm_4|24oct01 glm 1 2592 382334 384925 pf6 86 pf6_1:385098c|mal6p1.83 pf6_1:385098c mal6p1.83 chr6_0089.glm_5+6+7|24oct01 glm 12 1041 385098 385243 385323 385396 385537 385638 385733 385798 385899 385965 386084 386148 386243 386311 386410 386443 386522 386627 386780 386858 386995 387148 387284 387362 pf6 87 pf6_1:387783w|mal6p1.84 pf6_1:387783w mal6p1.84 chr6_0089.glm_8|24oct01 glm 1 3969 387783 391751 pf6 88 pf6_1:391865c|mal6p1.85 pf6_1:391865c mal6p1.85 chr6_0089.glm_9|03oct02 sanger 4 471 391865 391923 392086 392178 392325 392551 392721 392812 pf6 89 pf6_1:393203w|mal6p1.86 pf6_1:393203w mal6p1.86 chr6_0089.glm_10|24oct01 vbc 2 5616 393203 397453 397998 399362 pf6 90 pf6_1:399879c|mal6p1.87 pf6_1:399879c mal6p1.87 chr6_0089.glm_11|24oct01 vbc 2 345 399879 399969 400253 400506 pf6 91 pf6_1:401771c|mal6p1.88 pf6_1:401771c mal6p1.88 chr6_0089.glm_12|24oct01 vbc 2 708 401771 402369 402658 402766 pf6 92 pf6_1:405220w|mal6p1.89 pf6_1:405220w mal6p1.89 chr6_0089.glm_13|24oct01 vbc 2 852 405220 405250 405447 406267 pf6 93 pf6_1:408382w|mal6p1.90 pf6_1:408382w mal6p1.90 chr6_0089.glm_14|24oct01 glm 2 1632 408382 409891 410073 410194 pf6 94 pf6_1:412626w|mal6p1.91 pf6_1:412626w mal6p1.91 chr6_0089.glm_15|24oct01 glm 1 1245 412626 413870 pf6 95 pf6_1:415278w|mal6p1.92 pf6_1:415278w mal6p1.92 chr6_0089.glm_16|03oct02 sanger 2 2988 415278 418220 418406 418450 pf6 96 pf6_1:420252w|mal6p1.93 pf6_1:420252w mal6p1.93 chr6_0089.glm_17|24oct01 glm 1 18234 420252 438485 pf6 97 pf6_1:438906c|mal6p1.94 pf6_1:438906c mal6p1.94 chr6_0089.glm_18|24oct01 vbc 7 1086 438906 439106 439274 439338 439439 439526 439690 439808 439897 440038 440169 440229 440330 440739 pf6 98 pf6_1:442982w|mal6p1.95 pf6_1:442982w mal6p1.95 chr6_0089.glm_20+21|24oct01 vbc 2 1398 442982 443201 443425 444602 pf6 99 pf6_1:446233w|mal6p1.96 pf6_1:446233w mal6p1.96 chr6_0089.glm_23|24oct01 glm 2 2964 446233 449060 449145 449280 pf6 100 pf6_1:449804c|mal6p1.97 pf6_1:449804c mal6p1.97 chr6_0089.glm_24|24oct01 glm 1 1812 449804 451615 pf6 101 pf6_1:452713.ew|mal6p1.98_pars_prior+mal6p1.98 pf6_1:452713.1w mal6p1.98_pars_prior+mal6p1.98_pars_altera chr6_0089.glm_25+26|03oct02|alt1 sanger/vbc /vbc 9 3048 " alternative binding required, no tc binding site " 452713 452808 452956 453025 453540 453692 453781 453859 454008 454155 454242 454377 454531 454697 454879 455157 455314 457233 pf6 102 pf6_1:453569.ew|mal6p1.98_pars_prior+mal6p1.98 pf6_1:453569.2w mal6p1.98_pars_prior+mal6p1.98_pars_altera chr6_0089.glm_25+26|03oct02|alt2 vbc 7 2853 453569 453692 453781 453859 454008 454155 454242 454377 454531 454697 454879 455157 455314 457233 pf6 103 pf6_2:458032w|mal6p1.99+mal6p1.100 pf6_2:458032w mal6p1.99+mal6p1.100 chr6_0089.glm_27+chrblob_4205.glm_1|03oct02 sanger/vbc /vbc 5 10101 absence of atg 458032 461295 461484 461930 462959 463940 464115 469456 469706 469771 pf6 104 pf6_2:471147c|mal6p1.101 pf6_2:471147c mal6p1.101 chr6_0020.glm_2|24oct01 vbc 4 816 471147 471260 471412 471933 472188 472315 472561 472612 pf6 105 pf6_2:475798w|mal6p1.102 pf6_2:475798w mal6p1.102 chr6_0020.glm_1|24oct01 vbc 1 6051 475798 481848 pf6 106 pf6_2:482931w|mal6p1.103 pf6_2:482931w mal6p1.103 chr6_0068.glm_1|03oct02 sanger 3 957 482931 482948 483110 483458 483579 484168 pf6 107 pf6_2:484797c|mal6p1.104 pf6_2:484797c mal6p1.104 chr6_0068.glm_2+3|24oct01 vbc 3 1335 484797 485959 486108 486209 486386 486455 pf6 108 pf6_2:487653c|mal6p1.105 pf6_2:487653c mal6p1.105 chr6_0068.glm_4|24oct01 glm 1 2883 487653 490535 pf6 109 pf6_2:494737w|mal6p1.106 pf6_2:494737w mal6p1.106 chr6_0067.gen_1|24oct01 vbc pseudogene or fragment pseudogene or fragment 1 407 frameshift near 494881 494851w [CCa] | 494875 [T] | 494896 [GA] 494737 495143 pf6 110 pf6_2:495747c|mal6p1.107|03oct02 pf6_2:495747c mal6p1.107|03oct02 sanger 2 372 495747 496017 496249 496349 pf6 111 pf6_2:499277w|mal6p1.108 pf6_2:499277w mal6p1.108 chrblob_4291.glm_11|24oct01 glm 2 1530 499277 500564 500943 501184 pf6 112 pf6_2:502653w|mal6p1.109 pf6_2:502653w mal6p1.109 chrblob_4291.glm_10|24oct01 vbc 3 264 502653 502687 502856 502984 503333 503432 pf6 113 pf6_2:503657w|mal6p1.110 pf6_2:503657w mal6p1.110 chrblob_4291.glm_9|24oct01 glm 1 2019 503657 505675 pf6 114 pf6_2:506733c|mal6p1.111 pf6_2:506733c mal6p1.111 chrblob_4291.glm_8|24oct01 glm 1 3843 506733 510575 pf6 115 pf6_2:513550c|mal6p1.112 pf6_2:513550c mal6p1.112 chrblob_4291.glm_7|24oct01 vbc 3 849 513550 513686 513809 514372 514491 514638 pf6 116 pf6_2:516184c|mal6p1.113 pf6_2:516184c mal6p1.113 chrblob_4291.glm_5|24oct01 glm 1 252 516184 516435 pf6 117 pf6_2:517852w|mal6p1.114 pf6_2:517852w mal6p1.114 chrblob_4291.glm_4|24oct01 glm 2 633 517852 518366 518511 518628 pf6 118 pf6_2:520035w|mal6p1.115 pf6_2:520035w mal6p1.115 chrblob_4291.glm_2+3|24oct01 vbc 3 843 520035 520037 520210 520718 520880 521210 pf6 119 pf6_2:521644c|mal6p1.116 pf6_2:521644c mal6p1.116 chrblob_4291.glm_1|24oct01 glm 1 2493 521644 524136 pf6 120 pf6_3:531149c|mal6p1.309 pf6_3:531149c mal6p1.309 chr6_0085.glm_1+2|24oct01 vbc 1 1083 531149 532231 pf6 121 pf6_3:533438c|mal6p1.308 pf6_3:533438c mal6p1.308 chr6_0085.glm_3|24oct01 glm 1 1953 533438 535390 pf6 122 pf6_3:539182c|mal6p1.307 pf6_3:539182c mal6p1.307 chr6_0085.glm_4.1=gen_15|24oct01 gen 5 9747 539182 539283 539395 539488 539607 539753 539902 539974 540134 549464 pf6 123 pf6_3:550758w|bis pf6_3:550758w bis mal6p1.306a chr6_0085.glm_5|24oct01 glm 2 189 550758 550867 551032 551110 pf6 124 pf6_3:554703w|mal6p1.306 pf6_3:554703w mal6p1.306 chr6_0085.glm_6|24oct01 vbc 3 531 554703 555064 555166 555295 555483 555521 pf6 125 pf6_4:556001c|mal6p1.305 pf6_4:556001c mal6p1.305 mal6p1.305|03oct02 sanger 3 255 556001 556107 556345 556402 556520 556609 pf6 126 pf6_4:557483c|mal6p1.304 pf6_4:557483c mal6p1.304 chr6_0085.glm_8|24oct01 glm 1 1971 557483 559453 pf6 127 pf6_4:561295c|mal6p1.303 pf6_4:561295c mal6p1.303 chr6_0085.glm_9|24oct01 vbc 8 5595 561295 561396 561611 561921 562042 562105 562204 562354 562473 562564 562719 562791 562921 562967 563116 567870 pf6 128 pf6_4:569550w|mal6p1.302 pf6_4:569550w mal6p1.302 chr6_0085.glm_10|24oct01 glm 1 711 569550 570260 pf6 129 pf6_4:570623c|mal6p1.301 pf6_4:570623c mal6p1.301 chr6_0085.glm_11|24oct01 glm 1 366 570623 570988 pf6 130 pf6_4:571980c|mal6p1.300 pf6_4:571980c mal6p1.300 chr6_0085.glm_12|24oct01 glm 1 1449 571980 573428 pf6 131 pf6_4:574310c|mal6p1.299 pf6_4:574310c mal6p1.299 chr6_0085.glm_13|24oct01 glm 1 1044 574310 575353 pf6 132 pf6_4:576383c|mal6p1.298 pf6_4:576383c mal6p1.298 chr6_0085.glm_14|24oct01 vbc 2 1179 576383 577519 577677 577718 pf6 133 pf6_4:579447w|mal6p1.296 pf6_4:579447w mal6p1.296 chr6_0085.glm_15|24oct01 glm 1 2061 579447 581507 pf6 134 pf6_4:582729c|mal6p1.295 pf6_4:582729c mal6p1.295 chr6_0085.glm_16|24oct01 dm/vbc pf6_4:582729c mal6p1.295 chr6_0085.glm_16|24oct01 dm/vbc 4 354 582729 582774 583180 583359 583472 583567 583654 583685 pf6 135 pf6_4:586099w|mal6p1.294 pf6_4:586099w mal6p1.294 chr6_0085.glm_18|03oct02 sanger/vbc /vbc 4 237 586099 586161 586332 586387 586687 586750 586853 586906 pf6 136 pf6_4:587625w|mal6p1.293|03oct02 pf6_4:587625w mal6p1.293|03oct02 sanger 2 183 587625 587664 587853 587995 pf6 137 pf6_4:588398c|mal6p1.292 pf6_4:588398c mal6p1.292 chr6_0085.glm_20|24oct01 vbc 4 4269 588398 592242 592418 592586 592746 592805 592925 593119 pf6 138 pf6_4:595284w|mal6p1.291 pf6_4:595284w mal6p1.291 chr6_0085.glm_21|24oct01 vbc 2 642 595284 595487 595624 596061 pf6 139 pf6_4:596600c|mal6p1.290 pf6_4:596600c mal6p1.290 chr6_0085.glm_22|24oct01 glm 1 4092 596600 600691 pf6 140 pf6_4:602873w|chr6_0078.glm_1+2|24oct01 pf6_4:602873w chr6_0078.glm_1+2|24oct01 vbc 2 3009 602873 602966 603634 606548 pf6 141 pf6_4:607669c|mal6p1.288 pf6_4:607669c mal6p1.288 chr6_0078.glm_3|24oct01 glm 1 2112 607669 609780 pf6 142 pf6_4:614457w|mal6p1.287 pf6_4:614457w mal6p1.287 chr6_0078.glm_4+chr6_0091.glm_1|24oct01 vbc 3 12330 614457 623313 623634 626150 626356 627311 pf6 143 pf6_4:627753c|mal6p1.286 pf6_4:627753c mal6p1.286 chr6_0091.glm_2|24oct01 glm 1 6462 627753 634214 pf6 144 pf6_4:635337c|mal6p1.285 pf6_4:635337c mal6p1.285 chr6_0091.glm_3|24oct01 glm 2 1638 635337 636953 637033 637053 pf6 145 pf6_4:637775c|mal6p1.284 pf6_4:637775c mal6p1.284 chr6_0091.glm_4|24oct01 glm 1 2808 637775 640582 pf6 146 pf6_4:641490c|bis pf6_4:641490c bis mal6p1.284 chr6_0091.glm_5|24oct01 glm 1 2733 641490 644222 pf6 147 pf6_4:645803c|mal6p1.283 pf6_4:645803c mal6p1.283 chr6_0018.glm_1|24oct01 vbc 4 2562 645803 645967 646124 646196 646347 646438 646605 648836 pf6 148 pf6_4:652876w|mal6p1.282 pf6_4:652876w mal6p1.282 chr6_0094.glm_1|24oct01 glm 1 768 652876 653643 pf6 149 pf6_4:654445c|mal6p1.281 pf6_4:654445c mal6p1.281 chr6_0094.gen_1|24oct01 gen 3 549 654445 654884 655171 655276 655560 655562 pf6 150 pf6_4:657561c|mal6p1.280 pf6_4:657561c mal6p1.280 chr6_0053.glm_9|24oct01 glm 1 1845 657561 659405 pf6 151 pf6_4:660568w|mal6p1.279 pf6_4:660568w mal6p1.279 chr6_0053.glm_8|24oct01 vbc 3 1866 660568 660629 660785 662530 662644 662701 pf6 152 pf6_4:663600c|mal6p1.278 pf6_4:663600c mal6p1.278 chr6_0053.glm_7|24oct01 glm 1 1314 663600 664913 pf6 153 pf6_4:666065w|mal6p1.277 pf6_4:666065w mal6p1.277 chr6_0053.glm_6|24oct01 vbc 3 3291 666065 666137 666378 667393 667638 669839 pf6 154 pf6_4:670575w|mal6p1.276 pf6_4:670575w mal6p1.276 chr6_0053.glm_5|24oct01 glm 1 441 670575 671015 pf6 155 pf6_4:671326c|mal6p1.275 pf6_4:671326c mal6p1.275 chr6_0053.glm_4|24oct01 glm 1 1299 671326 672624 pf6 156 pf6_4:673668w|mal6p1.274 pf6_4:673668w mal6p1.274 chr6_0053.glm_3|24oct01 vbc 5 594 673668 673820 673945 674135 674308 674326 674410 674579 674688 674748 pf6 157 pf6_4:675996c|mal6p1.273 pf6_4:675996c mal6p1.273 chr6_0053.glm_2|24oct01 glm 1 2625 675996 678620 pf6 158 pf6_4:679273c|mal6p1.272 pf6_4:679273c mal6p1.272 chr6_0053.glm_1|24oct01 vbc 9 8202 679273 679342 679475 679557 679669 679716 679840 679896 680003 680067 680202 680253 680354 680431 680528 684646 684848 688477 pf6 159 pf6_4:692354w|mal6p1.271 pf6_4:692354w mal6p1.271 chr6_0054.glm_15|24oct01 glm 1 2118 692354 694471 pf6 160 pf6_4:694939c|mal6p1.270 pf6_4:694939c mal6p1.270 chr6_0054.glm_11+12+13+14|24oct01 vbc 8 7587 694939 694996 695153 695372 695493 700143 700369 702591 702740 702852 703038 703152 703411 703559 703841 703898 pf6 161 pf6_4:704678w|mal6p1.269|03oct02 pf6_4:704678w mal6p1.269|03oct02 sanger 7 471 704678 704702 704795 704859 705012 705086 705208 705285 705380 705448 705590 705653 705844 705938 pf6 162 pf6_4:706241c|mal6p1.268 pf6_4:706241c mal6p1.268 chr6_0054.glm_9.2+10|03oct02 sanger 2 3684 706241 709214 709382 710091 pf6 163 pf6_4:710737c|mal6p1.267 pf6_4:710737c mal6p1.267 chr6_0054.glm_9.1|24oct01 vbc 1 5421 710737 716157 pf6 164 pf6_4:718162w|mal6p1.266 pf6_4:718162w mal6p1.266 chr6_0054.glm_8|24oct01 vbc 3 1494 718162 719535 719677 719722 719861 719934 pf6 165 pf6_4:720421w|mal6p1.265 pf6_4:720421w mal6p1.265 chr6_0054.glm_7|24oct01 glm 2 444 720421 720618 720811 721056 pf6 166 pf6_4:722420w|mal6p1.264 pf6_4:722420w mal6p1.264 chr6_0054.glm_6|24oct01 vbc 5 1776 722420 723922 724025 724054 724170 724292 724427 724479 724612 724678 pf6 167 pf6_4:725191c|mal6p1.263 pf6_4:725191c mal6p1.263 chr6_0054.glm_5|24oct01 glm 1 684 725191 725874 pf6 168 pf6_4:726690w|mal6p1.262 pf6_4:726690w mal6p1.262 chr6_0054.glm_4|24oct01 glm 1 5043 726690 731732 pf6 169 pf6_4:733045w|mal6p1.261 pf6_4:733045w mal6p1.261 chr6_0054.glm_3|24oct01 glm 1 4116 733045 737160 pf6 170 pf6_4:737557c|mal6p1.260 pf6_4:737557c mal6p1.260 chr6_0054.glm_2|24oct01 vbc 1 1878 737557 739434 pf6 171 pf6_4:740072c|mal6p1.259 pf6_4:740072c mal6p1.259 chr6_0054.glm_1|24oct01 glm 1 1551 740072 741622 pf6 172 pf6_4:744232w|mal6p1.258 pf6_4:744232w mal6p1.258 chr6_0061.glm_2|24oct01 glm 1 1566 744232 745797 pf6 173 pf6_4:747555w|mal6p1.257 pf6_4:747555w mal6p1.257 chr6_0061.glm_1|24oct01 vbc 1 3966 747555 751520 pf6 174 pf6_4:752338c|mal6p1.256 pf6_4:752338c mal6p1.256 chr6.glm_203|03oct02 vbc 2 783 752338 753090 753420 753449 pf6 175 pf6_4:756535w|mal6p1.255 pf6_4:756535w mal6p1.255 chr6_0033.glm_1|24oct01 vbc 7 3711 756535 759143 759356 759898 760035 760203 760324 760524 760629 760670 760782 760840 760965 761052 pf6 176 pf6_4:763526w|mal6p1.254 pf6_4:763526w mal6p1.254 chr6_0024.glm_8|24oct01 vbc 4 1341 763526 763630 763796 764198 764422 765174 765314 765393 pf6 177 pf6_4:767011w|mal6p1.253 pf6_4:767011w mal6p1.253 chr6_0024.glm_7|24oct01 glm 3 420 767011 767121 767278 767457 767660 767788 pf6 178 pf6_4:769341c|olim pf6_4:769341c olim mal6p1.252 chr6_0024.glm_5+6|24oct01 vbc pfemp1 var pseudogene pfemp1 var pseudogene 2 7437 " pfemp1, stevors and rifins, possible misassembly taa at 769583 and taa at 769595 " 769341 770636 771826 777966 pf6 179 pf6_4:784735c|olim pf6_4:784735c olim mal6p1.251 chr6_0024.glm_3|24oct01 glm stevor stevor 2 909 784735 785574 785673 785741 pf6 180 pf6_4:787745c|olim pf6_4:787745c olim mal6p1.250 chr6_0024.glm_2|24oct01 glm stevor stevor 2 996 stevor in middle of chromosome: possible misassembly 787745 788665 788808 788882 pf6 181 pf6_4:794892c|mal6p1.249 pf6_4:794892c mal6p1.249 chr6_0024.glm_1|24oct01 glm 1 399 794892 795290 pf6 182 pf6_4:800872w|mal6p1.248 pf6_4:800872w mal6p1.248 chr6_0006.glm_4.1|24oct01 vbc 1 411 800872 801282 pf6 183 pf6_4:805086w|mal6p1.247 pf6_4:805086w mal6p1.247 chr6_0006.glm_4|24oct01 glm 1 2388 805086 807473 pf6 184 pf6_4:808416w|mal6p1.246 pf6_4:808416w mal6p1.246 chr6_0006.glm_3|24oct01 glm 1 2232 808416 810647 pf6 185 pf6_4:811144c|mal6p1.245 pf6_4:811144c mal6p1.245 chr6_0006.glm_2.1=gen_2|24oct01 gen 2 600 811144 811739 811966 811969 pf6 186 pf6_4:815269w|mal6p1.244 pf6_4:815269w mal6p1.244 chr6_0006.glm_2|24oct01 vbc 2 447 815269 815433 815652 815933 pf6 187 pf6_4:816624c|mal6p1.243 pf6_4:816624c mal6p1.243 chr6_0006.glm_1|24oct01 vbc 5 1797 experimental verification required 816624 816849 816940 817019 817170 817283 817446 817553 817715 818983 pf6 188 pf6_4:821008w|mal6p1.242 pf6_4:821008w mal6p1.242 chr6_0056.glm_4|24oct01 glm 1 942 821008 821949 pf6 189 pf6_4:822458c|mal6p1.241 pf6_4:822458c mal6p1.241 mal6p1.241|03oct02 vbc 8 825 822458 822548 822689 822767 822915 822964 823064 823176 823296 823383 823567 823613 823715 823823 824066 824313 pf6 190 pf6_4:825170w|mal6p1.240 pf6_4:825170w mal6p1.240 chr6_0056.glm_1.1|24oct01 vbc 2 855 825170 825992 826083 826114 pf6 191 pf6_4:826327.2c|bis pf6_4:826327.2c bis mal6p1.239 chr6_0056.glm_1|24oct01|alt2 vbc 2 1485 826327 827788 927891 927913 pf6 192 pf6_4:826327.1c|mal6p1.239 pf6_4:826327.1c mal6p1.239 chr6_0056.glm_1|24oct01|alt1 glm 2 3078 826327 827788 828158 829773 pf6 193 pf6_4:828154.2c|mal6p1.239 pf6_4:828154.2c mal6p1.239 chr6_0056.glm_1|24oct01|alt2 vbc 1 1620 828154 829773 pf6 194 pf6_4:831511w|mal6p1.238 pf6_4:831511w mal6p1.238 chr6_0057.glm_2|03oct02 sanger 9 1926 831511 832709 832846 832947 833069 833198 833400 833479 833560 833630 833725 833814 833931 834047 834154 834164 834379 834504 pf6 195 pf6_4:835184c|mal6p1.237|03oct02 pf6_4:835184c mal6p1.237|03oct02 vbc 14 5394 835184 835264 835408 835510 835659 836041 836168 836279 836419 836480 836586 836653 836769 836859 836959 837033 837203 841017 841209 841314 841439 841587 841740 841873 842030 842155 842414 842502 pf6 196 pf6_4:843182w|mal6p1.236 pf6_4:843182w mal6p1.236 chr6_0043.glm_1|03oct02 sanger/vbc /vbc 6 1083 843182 843248 843414 843456 843614 843648 843754 844011 844165 844387 844541 844997 pf6 197 pf6_4:845876w|mal6p1.235 pf6_4:845876w mal6p1.235 chr6_0074.glm_1+2|03oct02 sanger 2 3189 845876 846305 846510 849268 pf6 198 pf6_4:849853c|mal6p1.233+mal6p1.234 pf6_4:849853c mal6p1.233+mal6p1.234 chr6_0074.glm_3|24oct01 vbc 3 9410 frameshift near 852253 852252c [TA] 849853 850119 850286 850372 850529 859584 pf6 199 pf6_5:860654c|mal6p1.232 pf6_5:860654c mal6p1.232 chr6_0042.glm_8+9+10|24oct01 vbc 2 2486 frameshift near 862195 ? sequence error tga at 862248 862194c [GA] 860654 862838 862978 863278 pf6 200 pf6_5:865100c|mal6p1.231 pf6_5:865100c mal6p1.231 chr6_0042.glm_7|24oct01 glm 1 4179 865100 869278 pf6 201 pf6_5:870188w|mal6p1.230 pf6_5:870188w mal6p1.230 chr6_0042.glm_6|24oct01 glm 1 2616 870188 872803 pf6 202 pf6_5:873230c|mal6p1.228+mal6p1.229 pf6_5:873230c mal6p1.228+mal6p1.229 chr6_0042.glm_4+5|24oct01 vbc 3 1902 873230 873414 873536 874025 874194 875420 pf6 203 pf6_5:876317c|mal6p1.227 pf6_5:876317c mal6p1.227 chr6_0042.glm_2+3|24oct01 vbc 2 7593 sequence error? 876317 883693 883849 884064 pf6 204 pf6_5:885554w|mal6p1.226 pf6_5:885554w mal6p1.226 chr6_0042.glm_1.1=gen_9=phat_2|24oct01 gen phat 1 702 885554 886255 pf6 205 pf6_5:886877c|mal6p1.225 pf6_5:886877c mal6p1.225 chr6_0042.glm_1|24oct01 glm 1 1518 886877 888394 pf6 206 pf6_5:890690w|mal6p1.224 pf6_5:890690w mal6p1.224 chr6_0025.glm_4|24oct01 vbc 2 393 890690 890768 890874 891187 pf6 207 pf6_5:891553c|mal6p1.223 pf6_5:891553c mal6p1.223 chr6_0025.glm_3|24oct01 vbc 2 993 891553 892504 892797 892837 pf6 208 pf6_5:893435c|mal6p1.222 pf6_5:893435c mal6p1.222 chr6_0025.glm_2|24oct01 pf6_5:893435c mal6p1.222 chr6_0025.glm_2|24oct01 1 2460 893435 895894 pf6 209 pf6_5:896408c|mal6p1.221 pf6_5:896408c mal6p1.221 chr6_0025.glm_1|24oct01 glm msp10 msp10 1 1578 896408 897985 pf6 210 pf6_5:900193w|mal6p1.220 pf6_5:900193w mal6p1.220 chr6_0096.glm_12|24oct01 vbc 1 1953 900193 902145 pf6 211 pf6_5:902759w|mal6p1.219 pf6_5:902759w mal6p1.219 chr6_0096.glm_11|24oct01 vbc 1 885 902759 903643 pf6 212 pf6_5:904059c|mal6p1.218 pf6_5:904059c mal6p1.218 chr6_0096.glm_10|24oct01 glm 1 1089 904059 905147 pf6 213 pf6_5:906050w|ter pf6_5:906050w ter mal6p1.217 03oct02 sanger trna-ala-gcg trna-ala-gcg 1 72 906050 906121 pf6 214 pf6_5:906718c|ter pf6_5:906718c ter mal6p1.217 03oct02 sanger trna-leu-ctg trna-leu-ctg 1 81 906718 906798 pf6 215 pf6_5:907915w|mal6p1.217 pf6_5:907915w mal6p1.217 chr6_0096.glm_9|24oct01 glm 1 2535 907915 910449 pf6 216 pf6_5:910878c|mal6p1.216 pf6_5:910878c mal6p1.216 chr6_0096.glm_8|24oct01 glm 1 4065 910878 914942 pf6 217 pf6_5:916330c|mal6p1.215 pf6_5:916330c mal6p1.215 chr6_0096.glm_7|24oct01 glm 1 906 916330 917235 pf6 218 pf6_5:918843w|mal6p1.214 pf6_5:918843w mal6p1.214 chr6_0096.glm_6|24oct01 glm 1 2382 " partial, e n d @ chr6_0098.glm_1|24oct01 " 918843 921224 pf6 219 pf6_5:921742c|bis pf6_5:921742c bis mal6p1.213 chr6_0096.glm_5.1|24oct01 vbc 3 414 921742 921837 921905 922025 922157 922353 pf6 220 pf6_5:923824w|mal6p1.213 pf6_5:923824w mal6p1.213 chr6_0096.glm_5|24oct01 glm 1 1995 923824 925818 pf6 221 pf6_5:926997w|mal6p1.212 pf6_5:926997w mal6p1.212 chr6_0096.glm_4|24oct01 vbc 1 1032 926997 928028 pf6 222 pf6_5:928597c|bis pf6_5:928597c bis mal6p1.211 03oct02 sanger trna-ser-tca trna-ser-tca 1 82 928597 928678 pf6 223 pf6_6:929304w|mal6p1.211 pf6_6:929304wp mal6p1.211 chr6_0096.glm_3|03oct02 vbc 5 4919 929304w [AT] 929304 929354 929445 933958 934070 934171 934269 934338 934467 934648 pf6 224 pf6_6:937031w|mal6p1.210 pf6_6:937031w mal6p1.210 chr6_0096.glm_2|24oct01 glm 3 555 937031 937340 937467 937574 937675 937811 pf6 225 pf6_6:938484c|mal6p1.209 pf6_6:938484c mal6p1.209 chr6_0096.glm_1|24oct01 glm 1 2331 938484 940814 pf6 226 pf6_6:941959w|mal6p1.208 pf6_6:941959w mal6p1.208 chr6_0082.glm_11|03oct02 sanger 3 639 941959 942187 942299 942452 942683 942938 pf6 227 pf6_6:943311c|mal6p1.207 pf6_6:943311c mal6p1.207 chr6_0082.glm_10|24oct01 vbc 1 4023 943311 947333 pf6 228 pf6_6:948710c|mal6p1.206 pf6_6:948710c mal6p1.206 chr6_0082.glm_8|24oct01 glm 1 2583 948710 951292 pf6 229 pf6_6:952987w|mal6p1.205 pf6_6:952987w mal6p1.205 mal6p1.205|03oct02 sanger 4 2505 952987 953082 953249 953297 953453 955688 955943 956066 pf6 230 pf6_6:956473w|mal6p1.204 pf6_6:956473w mal6p1.204 chr6_0082.glm_6|24oct01 glm 1 387 956473 956859 pf6 231 pf6_6:957376c|mal6p1.203 pf6_6:957376c mal6p1.203 chr6_0082.glm_5|24oct01 glm 1 1305 957376 958680 pf6 232 pf6_6:960970c|mal6p1.202 pf6_6:960970c mal6p1.202 chr6_0082.glm_3|24oct01 glm 2 1146 960970 962007 962162 962269 pf6 233 pf6_6:964655w|mal6p1.201 pf6_6:964655w mal6p1.201 chr6_0082.glm_2|24oct01 glm 1 4344 964655 968998 pf6 234 pf6_6:970075c|mal6p1.200 pf6_6:970075c mal6p1.200 chr6_0082.glm_1|24oct01 vbc 2 6084 970075 976125 976217 976249 pf6 235 pf6_6:982039c|mal6p1.199 pf6_6:982039c mal6p1.199 chr6_0047.glm_3|03oct02 sanger 1 1584 982039 983622 pf6 236 pf6_6:984631c|mal6p1.198 pf6_6:984631c mal6p1.198 chr6_0073.glm_4+chr6_0047.glm_1+2|03oct02 sanger 12 2361 984631 985155 985328 985383 985485 985557 985683 985757 985866 985927 986129 986809 986924 986979 987190 987265 987453 987828 988039 988082 988204 988357 988510 988692 pf6 237 pf6_6:991101w|mal6p1.197 pf6_6:991101w mal6p1.197 chr6_0073.glm_3|24oct01 glm 1 1116 991101 992216 pf6 238 pf6_6:992465c|mal6p1.196 pf6_6:992465c mal6p1.196 chr6_0073.glm_2|24oct01 vbc 5 726 992465 992604 992768 992815 992953 993213 993355 993608 994016 994038 pf6 239 pf6_6:995195c|mal6p1.195 pf6_6:995195c mal6p1.195 chr6_0073.glm_1|24oct01 vbc 1 1284 995195 996478 pf6 240 pf6_6:997878c|mal6p1.194|03oct02 pf6_6:997878c mal6p1.194|03oct02 sanger/vbc /vbc 9 801 997878 997936 998078 998137 998243 998362 998452 998595 998890 998931 999031 999075 999215 999305 999462 999634 999754 999820 pf6 241 pf6_6:1001737w|mal6p1.193 pf6_6:1001737w mal6p1.193 chr6_0076.glm_3|24oct01 glm 2 1848 1001737 1003453 1003598 1003728 pf6 242 pf6_6:1004103c|mal6p1.192 pf6_6:1004103c mal6p1.192 chr6_0076.glm_2|24oct01 glm 1 3414 1004103 1007516 pf6 243 pf6_6:1008712c|mal6p1.191 pf6_6:1008712c mal6p1.191 chr6_0076.glm_1|24oct01 glm 1 7215 1008712 1015926 pf6 244 pf6_7:1021689w|mal6p1.190 pf6_7:1021689w mal6p1.190 chr6_0005.glm_1|24oct01 glm 1 867 1021689 1022555 pf6 245 pf6_7:1025570w|mal6p1.189 pf6_7:1025570w mal6p1.189 chr6_0004.glm_1|24oct01 glm 1 1482 1025570 1027051 pf6 246 pf6_7:1028450w|mal6p1.188 pf6_7:1028450w mal6p1.188 chr6_0004.glm_2|24oct01 vbc 1 768 1028450 1029217 pf6 247 pf6_7:1029551c|mal6p1.187 pf6_7:1029551c mal6p1.187 chr6_0004.glm_3|24oct01 sanger/vbc /vbc 7 1026 1029551 1029593 1029746 1029894 1029996 1030050 1030212 1030345 1030414 1030848 1031031 1031183 1031318 1031374 pf6 248 pf6_7:1034879c|mal6p1.185 pf6_7:1034879c mal6p1.185 chr6_0004.glm_5|24oct01 glm 1 1824 1034879 1036702 pf6 249 pf6_7:1038788w|mal6p1.184 pf6_7:1038788w mal6p1.184 chr6_0004.glm_6|24oct01 glm 1 270 1038788 1039057 pf6 250 pf6_7:1044028w|mal6p1.183 pf6_7:1044028w mal6p1.183 chr6_0004.glm_7|24oct01 vbc 1 8160 1044028 1052187 pf6 251 pf6_7:1053961c|mal6p1.182 pf6_7:1053961c mal6p1.182 chr6_0004.glm_8|24oct01 vbc 6 765 1053961 1054006 1054167 1054229 1054318 1054356 1054430 1054534 1054616 1054683 1054800 1055243 pf6 252 pf6_7:1055933c|mal6p1.181 pf6_7:1055933c mal6p1.181 chr6_0004.glm_9+10|24oct01 vbc 11 1872 1055933 1057256 1057384 1057405 1057582 1057780 1057881 1058011 1058221 1058227 1058314 1058330 1058473 1058499 1058612 1058641 1058739 1058765 1058870 1058899 1059016 1059073 pf6 253 pf6_7:1060372w|mal6p1.179+mal6p1.180 pf6_7:1060372w mal6p1.179+mal6p1.180 chr6_0004.glm_11+12+13|03oct02 sanger/vbc /vbc 11 1338 1060372 1060437 1060573 1060683 1060834 1061015 1061151 1061337 1061457 1061530 1061630 1061726 1061827 1061911 1062017 1062264 1062380 1062442 1062571 1062684 1062838 1062948 pf6 254 pf6_7:1064528w|mal6p1.178 pf6_7:1064528w mal6p1.178 chr6_0004.glm_14+15|03oct02 sanger 4 1386 1064528 1064819 1064938 1065707 1065947 1066072 1066182 1066379 pf6 255 pf6_7:1067519w|mal6p1.177 pf6_7:1067519w mal6p1.177 chr6_0004.glm_17|24oct01 glm 1 1200 1067519 1068718 pf6 256 pf6_7:1069683w|mal6p1.176|03oct02 pf6_7:1069683w mal6p1.176|03oct02 sanger 1 1158 1069683 1070840 pf6 257 pf6_7:1071327c|mal6p1.175 pf6_7:1071327c mal6p1.175 chr6_0004.glm_18|24oct01 vbc 1 4335 1071327 1075661 pf6 258 pf6_7:1077040c|mal6p1.174 pf6_7:1077040c mal6p1.174 chr6_0004.glm_19|24oct01 glm 1 1239 1077040 1078278 pf6 259 pf6_7:1079811w|mal6p1.173 pf6_7:1079811w mal6p1.173 chr6_0004.glm_20|24oct01 glm 1 1065 1079811 1080875 pf6 260 pf6_7:1084159w|mal6p1.172 pf6_7:1084159w mal6p1.172 chr6_0051.glm_19|24oct01 glm 1 1896 1084159 1086054 pf6 261 pf6_7:1087156c|mal6p1.171 pf6_7:1087156c mal6p1.171 chr6_0051.glm_18|24oct01 glm 1 297 1087156 1087452 pf6 262 pf6_7:1088050w|mal6p1.170 pf6_7:1088050w mal6p1.170 chr6_0051.glm_17|24oct01 glm 1 1929 1088050 1089978 pf6 263 pf6_7:1091490w|mal6p1.169 pf6_7:1091490w mal6p1.169 chr6_0051.glm_16|24oct01 glm 2 981 1091490 1092402 1092489 1092556 pf6 264 pf6_7:1093214c|mal6p1.168 pf6_7:1093214c mal6p1.168 chr6_0051.glm_15|24oct01 glm 1 5256 1093214 1098469 pf6 265 pf6_7:1100555w|mal6p1.167 pf6_7:1100555w mal6p1.167 chr6_0051.glm_12+14|03oct02 sanger 9 1152 1100555 1100655 1100823 1101034 1101192 1101321 1101451 1101563 1101694 1101860 1101960 1102087 1102208 1102360 1102522 1102627 1102991 1103032 pf6 266 pf6_7:1103169c|mal6p1.166 pf6_7:1103169c mal6p1.166 chr6_0051.glm_11|24oct01 glm 1 1257 1103169 1104425 pf6 267 pf6_7:1105618c|mal6p1.165 pf6_7:1105618c mal6p1.165 chr6_0051.glm_10|03oct02 sanger/vbc /vbc 3 1422 1105618 1106874 1107055 1107165 1107341 1107394 pf6 268 pf6_7:1109650w|mal6p1.164 pf6_7:1109650w mal6p1.164 chr6_0051.glm_8|24oct01 glm 1 3480 1109650 1113129 pf6 269 pf6_7:1114465w|mal6p1.163 pf6_7:1114465w mal6p1.163 chr6_0051.glm_7|24oct01 vbc 1 2844 1114465 1117308 pf6 270 pf6_8:1117961c|mal6p1.162 pf6_8:1117961c mal6p1.162 chr6_9.mal6p1_162|03oct02 sanger 1 438 1117961 1118398 pf6 271 pf6_8:1119521w|mal6p1.161 pf6_8:1119521w mal6p1.161 chr6_0051.glm_5|24oct01 glm 1 1119 1119521 1120639 pf6 272 pf6_8:1123498w|mal6p1.160 pf6_8:1123498w mal6p1.160 chr6_0051.glm_3|24oct01 vbc 3 1536 1123498 1123681 1123973 1124690 1125190 1125823 pf6 273 pf6_8:1127413w|mal6p1.159 pf6_8:1127413w mal6p1.159 chr6_0051.glm_2|24oct01 glm 1 1119 1127413 1128531 pf6 274 pf6_8:1129011c|mal6p1.158|03oct02 pf6_8:1129011c mal6p1.158|03oct02 sanger 1 333 1129011 1129343 pf6 275 pf6_8:1133696w|mal6p1.157 pf6_8:1133696w mal6p1.157 chr6_0081.glm_12|24oct01 glm 1 5139 1133696 1138834 pf6 276 pf6_8:1139633c|mal6p1.156 pf6_8:1139633c mal6p1.156 chr6_0081.glm_11|03oct02 sanger/vbc /vbc 7 438 1139633 1139714 1139804 1139895 1140035 1140138 1140246 1140297 1140418 1140471 1140683 1140730 1140876 1140881 pf6 277 pf6_8:1141808c|mal6p1.155 pf6_8:1141808c mal6p1.155 chr6_0081.glm_10|24oct01 glm 1 1350 1141808 1143157 pf6 278 pf6_8:1144785c|mal6p1.154 pf6_8:1144785c mal6p1.154 chr6_0081.glm_9|24oct01 glm 1 582 1144785 1145366 pf6 279 pf6_8:1146242c|mal6p1.153 pf6_8:1146242c mal6p1.153 chr6_0081.glm_8|24oct01 vbc 3 570 1146242 1146720 1147088 1147145 1147328 1147360 pf6 280 pf6_8:1148523w|mal6p1.152 pf6_8:1148523w mal6p1.152 chr6_0081.glm_7|03oct02 sanger 1 1185 1148523 1149707 pf6 281 pf6_8:1152703w|mal6p1.151 pf6_8:1152703w mal6p1.151 chr6_0081.glm_6|24oct01 glm 1 3444 1152703 1156146 pf6 282 pf6_8:1158708c|mal6p1.150 pf6_8:1158708c mal6p1.150 chr6_0081.glm_5|24oct01 glm 2 3033 1158708 1158784 1159088 1162043 pf6 283 pf6_8:1164093w|mal6p1.149 pf6_8:1164093w mal6p1.149 chr6_0081.glm_4|24oct01 vbc 3 876 1164093 1164428 1164701 1165066 1165191 1165364 pf6 284 pf6_8:1166196w|mal6p1.148 pf6_8:1166196w mal6p1.148 chr6_0081.glm_3|24oct01 glm 1 522 1166196 1166717 pf6 285 pf6_8:1167307c|mal6p1.147 pf6_8:1167307c mal6p1.147 chr6_0081.glm_1+2|24oct01 vbc 1 30863 frameshift near 1173346 1173347c [AA] 1167307 1198169 pf6 286 pf6_8:1204367w|mal6p1.146 pf6_8:1204367w mal6p1.146 chr6_0092.glm_18|24oct01 glm 1 9219 1204367 1213585 pf6 287 pf6_8:1215318c|mal6p1.145 pf6_8:1215318c mal6p1.145 chr6_0092.glm_17|03oct02 sanger/vbc /vbc 12 1176 1215318 1215563 1215707 1215801 1215910 1215966 1216120 1216193 1216410 1216478 1216641 1216729 1216857 1216928 1217080 1217118 1217252 1217314 1217447 1217542 1217720 1217860 1218067 1218201 pf6 288 pf6_9:1220771w|mal6p1.144 pf6_9:1220771w mal6p1.144 chr6_0092.glm_16|24oct01 vbc 7 927 1220771 1220788 1221205 1221310 1221474 1221555 1221658 1221857 1221990 1222221 1222547 1222635 1222894 1223093 pf6 289 pf6_9:1223559c|mal6p1.143 pf6_9:1223559c mal6p1.143 chr6_0092.glm_14|24oct01 glm 1 951 1223559 1224509 pf6 290 pf6_9:1225079c|mal6p1.142 pf6_9:1225079c mal6p1.142 chr6_0092.glm_13|03oct02 sanger 5 1158 1225079 1225150 1225293 1225356 1225505 1225677 1225850 1226548 1226710 1226859 pf6 291 pf6_9:1228372w|mal6p1.141 pf6_9:1228372w mal6p1.141 chr6_0092.glm_12.1=phat_11|24oct01 phat 1 1752 1228372 1230123 pf6 292 pf6_9:1230502c|mal6p1.140 pf6_9:1230502c mal6p1.140 chr6_0092.glm_12|24oct01 vbc 1 2616 1230502 1233117 pf6 293 pf6_9:1233978w|mal6p1.139 pf6_9:1233978w mal6p1.139 chr6_0092.glm_11|24oct01 vbc 3 4329 1233978 1238036 1238121 1238171 1238266 1238484 pf6 294 pf6_9:1238810c|mal6p1.138 pf6_9:1238810c mal6p1.138 chr6_0092.glm_10|24oct01 glm 1 876 1238810 1239685 pf6 295 pf6_9:1240547c|mal6p1.137 pf6_9:1240547c mal6p1.137 chr6_0092.glm_9|24oct01 vbc 1 1998 1240547 1242544 pf6 296 pf6_9:1244359c|mal6p1.136 pf6_9:1244359c mal6p1.136 chr6_0092.glm_8|24oct01 vbc 1 1143 1244359 1245501 pf6 297 pf6_9:1249697w|mal6p1.135 pf6_9:1249697w mal6p1.135 chr6_0092.glm_7|24oct01 glm 1 2592 1249697 1252288 pf6 298 pf6_9:1254926w|mal6p1.134 pf6_9:1254926w mal6p1.134 chr6_0092.glm_5|24oct01 glm 1 2343 1254926 1257268 pf6 299 pf6_9:1258454c|mal6p1.133 pf6_9:1258454c mal6p1.133 chr6_0092.glm_4|24oct01 glm 2 1821 1258454 1258598 1258836 1260511 pf6 300 pf6_9:1262813w|mal6p1.132 pf6_9:1262813w mal6p1.132 chr6_0092.glm_3|24oct01 glm stevor stevor 2 780 1262813 1262887 1263053 1263757 pf6 301 pf6_9:1266447w|mal6p1.131 pf6_9:1266447w mal6p1.131 chr6_0092.glm_1+chr6_0083.glm_1|24oct01 vbc 6 20262 1266447 1286077 1286254 1286368 1286489 1286650 1286805 1286975 1287119 1287226 1287353 1287427 pf6 302 pf6_9:1288085c|mal6p1.130 pf6_9:1288085c mal6p1.130 chr6_0083.glm_2|24oct01 glm 2 3390 1288085 1291422 1291673 1291724 pf6 303 pf6_9:1294917w|mal6p1.129 pf6_9:1294917w mal6p1.129 chr6_0083.glm_3+4|24oct01 vbc 3 987 1294917 1295561 1295703 1295861 1295974 1296156 pf6 304 pf6_9:1296557c|mal6p1.128 pf6_9:1296557c mal6p1.128 chr6_0083.glm_5|03oct02 sanger 10 843 1296557 1296687 1296775 1296853 1297047 1297123 1297268 1297356 1297479 1297539 1297664 1297710 1297838 1297877 1297963 1298023 1298105 1298240 1298368 1298489 pf6 305 pf6_9:1299411c|mal6p1.127 pf6_9:1299411c mal6p1.127 chr6_0083.glm_6|24oct01 glm 1 2034 1299411 1301444 pf6 306 pf6_9:1303384w|mal6p1.126 pf6_9:1303384w mal6p1.126 mal6p1.126 |03oct02 vbc 5 408 must be experimentally verified 1303384 1303476 1303623 1303685 1303787 1303926 1304061 1304134 1304406 1304443 pf6 307 pf6_9:1304902c|mal6p1.125 pf6_9:1304902c mal6p1.125 chr6_0079.glm_2+3+4|24oct01 vbc 4 8724 1304902 1305105 1305278 1311356 1311555 1313787 1313893 1314100 pf6 308 pf6_9:1317116c|mal6p1.124 pf6_9:1317116c mal6p1.124 chr6_0017.glm_1|24oct01 glm 1 1170 1317116 1318285 pf6 309 pf6_9:1321082w|mal6p1.123 pf6_9:1321082w mal6p1.123 chr6_0017.glm_2|24oct01 glm 1 1497 1321082 1322578 pf6 310 pf6_9:1324572w|mal6p1.122 pf6_9:1324572w mal6p1.122 chr6_0017.glm_3|24oct01 glm 2 2811 1324572 1324679 1325143 1327845 pf6 311 pf6_9:1329810w|mal6p1.121 pf6_9:1329810w mal6p1.121 chr6_0017.glm_4|24oct01 glm 1 1974 1329810 1331783 pf6 312 pf6_9:1332989w|mal6p1.120 pf6_9:1332989w mal6p1.120 chrblob_4150.glm_1+2+3|24oct01 vbc 11 1176 1332989 1333084 1333196 1333261 1333461 1333532 1333630 1333715 1333910 1334072 1334192 1334357 1334470 1334512 1334641 1334802 1334908 1335013 1335185 1335268 1335426 1335557 pf6 313 pf6_9:1335617c|mal6p1.119 pf6_9:1335617c mal6p1.119 chrblob_4150.glm_4|24oct01 pf6_9:1335617c mal6p1.119 chrblob_4150.glm_4|24oct01 3 1872 1335617 1335709 1335811 1335930 1336063 1337721 pf6 314 pf6_9:1340226w|mal6p1.117 pf6_9:1340226w mal6p1.117 chr8_170.glm_1|24oct01 glm 1 858 similar to chr6_0050.glm_1|24oct01 vbc 1340226 1341083 pf6 315 pf6_9:1341727w|mal6p1.310 pf6_9:1341727w mal6p1.310 chrblob_0038.glm_1|24oct01 vbc stevor fragment stevor fragment 1 269 possible misassembly 1341757w [G] | 1341854 [G] 1341727 1341995 pf6 316 pf6_9:1344355w|olim pf6_9:1344355w olim mal6p1.311 chr6_0052.glm_2|24oct01 glm rifin rifin 2 1050 1344355 1344408 1344639 1345634 pf6 317 pf6_9:1346088w|mal6p1.312 pf6_9:1346088w mal6p1.312 chr6_0052.glm_3|24oct01 vbc pfemp1 var fragment pfemp1 var fragment 2 1350 1346088 1346186 1346731 1347981 pf6 318 pf6_9:1349769c|olim pf6_9:1349769c olim mal6p1.313 chrblob_0074.glm_1|24oct01 glm rifin rifin 2 1119 1349769 1350833 1350989 1351042 pf6 319 pf6_9:1354878w|olim pf6_9:1354878w olim mal6p1.314 chr6_0034.glm_1+chrblob_3233a|24oct01 vbc pfemp1 var pfemp1 var 2 3978 chrblob_3233b = chr9:1487093..1488885 1354878 1357619 1357778 1359013 pf6 320 pf6_9:1361189w|olim pf6_9:1361189w olim mal6p1.315 chr6_0090.glm_2+chr6_0087|24oct01 glm rifin rifin 2 1116 1361189 1361242 1361473 1362534 pf6 321 pf6_9:1364764c|olim pf6_9:1364764c olim mal6p1.316 chr6_0065.glm_4|24oct01 vbc pfemp1 var pfemp1 var 2 8640 1364764 1365969 1366663 1374096 pf6 322 pf6_9:1376167w|olim pf6_9:1376167wp olim mal6p1.317|03oct02 sanger/vbc pfemp1 var /vbc pfemp1 var 1 759 assembly error ? 1376167 1376925