record GenBank ID history name product exons length notes frameshift 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 pf4 1 pf4_1:35153w|pfd0005w pf4_1:35153w pfd0005w chr4_1.glm_9+11|24oct01 vbc pfemp1 var pfemp1 var 2 7941 35153 41725 42757 44124 pf4 2 pf4_1:45402w|pfd0010w pf4_1:45402w pfd0010w chr4_1.glm_12|24oct01 vbc var-c pfemp1 fragment e x o n 2 var-c pfemp1 fragment e x o n 2 1 1200 45402 46601 pf4 3 pf4_1:48479c|pfd0015c pf4_1:48479c pfd0015c chr4_1.glm_13|24oct01 glm rifin rifin 2 1113 48479 49537 49768 49821 pf4 4 pf4_1:52002c|pfd0020c pf4_1:52002c pfd0020c chr4_1.glm_14|24oct01 vbc pfemp1 var pfemp1 var 2 10404 52002 53297 54200 63307 pf4 5 pf4_1:66083w|pfd0025w pf4_1:66083w pfd0025w chr4_1.glm_15|24oct01 glm rifin rifin 2 1149 66083 66136 66292 67386 pf4 6 pf4_1:69551c|pfd0030c pf4_1:69551c pfd0030c chr4_1.glm_16|24oct01 glm rifin rifin 2 1143 69551 70639 70870 70923 pf4 7 pf4_1:73048c|pfc0035c pf4_1:73048c pfc0035c chr4_1.glm_17|24oct01 vbc stevor stevor 2 870 73048 73848 73952 74020 pf4 8 pf4_1:76408c|pfd0040c pf4_1:76408c pfd0040c chr4_1.glm_18|24oct01 glm rifin rifin 2 990 76408 77343 77507 77560 pf4 9 pf4_1:79715c|pfd0045c pf4_1:79715c pfd0045c chr4_1.glm_19|24oct01 glm stevor stevor 2 930 79715 80575 80719 80787 pf4 10 pf4_1:82480c|bis pf4_1:82480c bis pfd0045c chr4_1.glm_20|24oct01 vbc rifin pseudogene rifin pseudogene 2 422 subtelomeric copy chr 1, 2, 3, 4, 7, 9, 10, 11, 12, 13, 14 copy of pf9_1:36430c 82790c [TAg] 82480 82847 83067 83120 pf4 11 pf4_1:85640w|pfd0050w pf4_1:85640w pfd0050w chr4_1.glm_21|24oct01 glm rifin rifin 2 1104 85640 85693 85849 86898 pf4 12 pf4_1:88694w|pfd0055w pf4_1:88694w pfd0055w chr4_1.glm_22|24oct01 vbc rifin rifin 2 1128 88694 88747 88949 90022 pf4 13 pf4_1:91844w|pfd0060w pf4_1:91844w pfd0060w chr4_1.glm_23|24oct01 glm rifin rifin 2 990 91844 91897 92120 93055 pf4 14 pf4_1:95600w|pfd0065w pf4_1:95600w pfd0065w chr4_1.glm_24+25|24oct01 vbc rifin pseudogene rifin pseudogene 2 918 95600 95653 95768 96631 pf4 15 pf4_1:99023c|pfd0070c pf4_1:99023c pfd0070c chr4_1.glm_26|24oct01 vbc stevor stevor 2 1044 99023 99994 100185 100256 pf4 16 pf4_1:107134w|pfd0075w pf4_1:107134w pfd0075w chr4_1.glm_27|24oct01 vbc stevor pseudogene stevor pseudogene 2 1332 taa at 107325 and taa at 107460 alignment with pf4:1133287c pfd1190c+1195c 107134 107202 107298 108560 pf4 17 pf4_1:110192c|pfd0080c pf4_1:110192c pfd0080c chr4_1.glm_28|24oct01 glm 2 1683 110192 111778 111958 112053 pf4 18 pf4_1:114830c|pfd0085c pf4_1:114830c pfd0085c chr4_1.glm_29|24oct01 glm 1 2916 114830 117745 pf4 19 pf4_1:121052c|pfd0090c pf4_1:121052c pfd0090c chr4_1.glm_30|24oct01 glm 2 1287 121052 122188 122360 122509 pf4 20 pf4_1:130044c|pfd0095c pf4_1:130044c pfd0095c chr4_1.glm_31|24oct01 vbc 2 1728 130044 131687 131837 131920 pf4 21 pf4_1:134169c|pfd0100c+pfd0105c pf4_1:134169c pfd0100c+pfd0105c chr4_1.glm_32+33+34|24oct01 vbc 2 6663 frameshifts near 138400 and 137026 read through taa @ 138342 138401c [AT] | 137028 [A] 134169 138461 138556 140925 pf4 22 pf4_1:144098w|pfd0110w pf4_1:144098w pfd0110w chr4_1.glm_35+chrblob3137.glm_1|24oct01 vbc 2 8917 frameshift near 152490 152500w [A] 144098 144152 144251 153112 pf4 23 pf4_1:153950c|pfd0115c pf4_1:153950c pfd0115c chr4_1.glm_36|24oct01 glm 2 765 153950 154606 154733 154840 pf4 24 pf4_1:162335w|pfd0120w pf4_1:162335w pfd0120w chr4_1.glm_38+39|24oct01 vbc stevor pseudogene stevor pseudogene 2 990 162335 162406 162525 163442 pf4 25 pf4_1:165737c|pfd0125c pf4_1:165737c pfd0125c chr4_1.glm_40|24oct01 vbc 2 906 165737 166594 166725 166772 pf4 26 pf4_1:168969c|pfd0130c+pfd0135c pf4_1:168969c pfd0130c+pfd0135c chr4_1.glm_41+42|24oct01 vbc 2 949 frameshift near 169500 169500c [G] 168969 169897 170163 170182 pf4 27 pf4_1:171893w|bis pf4_1:171893w bis pfd0135w|30oct00 vbc 1 264 171893 172156 pf4 28 pf4_1:173787w|pfd0140w pf4_1:173787w pfd0140w chr4_1.glm_43+44+45+46+47|24oct01 vbc pfemp1 var note member of a pseudogene family pfemp1 var note member of a pseudogene family 2 4250 t pf4_1:173787w pfd0140w chr4_1.glm_43+44+45+46+47|24oct01 vbc pfemp1 var note member of a pseudogene family alignment to chr1 var-c fragment 174366w [A] | 174727 [AA] | 174953 [A] | 175651 [A] | 177772 [AA] | 177930 [A] 173787 176734 177142 178443 pf4 29 pf4_1:178964c|pfd0144c|03oct02 pf4_1:178964c pfd0144c|03oct02 sanger 2 300 178964 179169 179279 179372 pf4 30 pf4_1:181288w|bis pf4_1:181288w bis pfd0144w sanger trna-asn-aac trna-asn-aac 1 74 chr3 528576..528649 plastid a @ 1809 trna-asn-aac 181288 181361 pf4 31 pf4_1:181831c|pfd0145c pf4_1:181831c pfd0145c chr4_1.glm_48|24oct01 glm 1 1881 181831 183711 pf4 32 pf4_1:184977w|pfd0150w pf4_1:184977w pfd0150w chr4_1.glm_49|24oct01 glm 1 1683 184977 186659 pf4 33 pf4_1:186889c|pfd0155c|03oct02 pf4_1:186889c pfd0155c|03oct02 sanger 5 459 186889 186957 187150 187233 187408 187473 187661 187731 187842 188010 pf4 34 pf4_1:189329w|pfd0160w pf4_1:189329w pfd0160w chr4_1.glm_50+51|24oct01 vbc 3 11478 189329 194686 194857 200469 200665 201171 pf4 35 pf4_1:202002w|pfd0165w pf4_1:202002w pfd0165w chr4_1.glm_52|24oct01 glm 1 1203 202002 203204 pf4 36 pf4_1:204305c|pfd0170c pf4_1:204305c pfd0170c chr4_1.glm_53+54|24oct01 vbc 2 2307 204305 206229 207286 207667 pf4 37 pf4_1:212692c|pfd0180c pf4_1:212692c pfd0180c chr4_1.glm_55+56+57|24oct01 vbc 6 2343 212692 213090 213222 213527 213658 213756 213904 214011 214269 215672 215832 215858 pf4 38 pf4_1:218114c|pfd0185c pf4_1:218114c pfd0185c chr4_1.glm_58|24oct01 vbc 1 2205 occam's razor 218114 220318 pf4 39 pf4_1:225550w|pfd0190w pf4_1:225550w pfd0190w chr4_1.glm_59+60|24oct01 vbc 2 3561 225550 225795 225987 229301 pf4 40 pf4_1:230174c|pfd0195c pf4_1:230174c pfd0195c chr4_1.glm_61|24oct01 glm 2 300 230174 230365 230487 230594 pf4 41 pf4_1:231242c|pfd0200c pf4_1:231242c pfd0200c chr4_1.glm_62+63|24oct01 vbc 2 6817 frameshift near 237793 237795c [A] 231242 231646 231786 238197 pf4 42 pf4_1:239059c|pfd0205c pf4_1:239059c pfd0205c chr4_1.glm_64|24oct01 vbc 2 492 239059 239139 239303 239713 pf4 43 pf4_1:240478c|pfd0207c|03oct02 pf4_1:240478c pfd0207c|03oct02 chr4_1.glm_65+66|24oct01 vbc 8 1860 240478 240584 240708 240959 241173 241341 241437 241503 241590 242748 242865 242913 243304 243357 243471 243473 pf4 44 pf4_1:244820c|pfd0215c|03ict02 pf4_1:244820c pfd0215c|03ict02 chr4_1.glm_67|24oct01 vbc 2 1239 244820 245976 246169 246250 pf4 45 pf4_1:247371c|olim pf4_1:247371c olim pfd0220c chr4_1.glm_68|24oct01 vbc 1 1395 247371 248765 pf4 46 pf4_1:254195w|pfd0225w pf4_1:254195w pfd0225w chr4_1.glm_69|24oct01 glm 1 12417 254195 266611 pf4 47 pf4_1:266919c|pfd0230c pf4_1:266919c pfd0230c chr4_1.glm_70+71|24oct01| vbc 2 2820 266919 269422 269568 269883 pf4 48 pf4_1:270770c|pfd0235c pf4_1:270770c pfd0235c chr4_1.glm_72|24oct01 glm 2 1704 270770 270878 271041 272635 pf4 49 pf4_1:273709c|pfd0240c pf4_1:273709c pfd0240c chr4_1.glm_72.1|24oct01 vbc 1 1137 273709 274845 pf4 50 pf4_1:275425c|pfd0245c pf4_1:275425c pfd0245c pfd0245c chr4_1.glm_73|24oct01 vbc 3 1704 275425 275683 275859 276162 276459 277599 pf4 51 pf4_1:278720c|pfd0250c pf4_1:278720c pfd0250c chr4_1.glm_74|24oct01 vbc 5 4089 278720 278843 278956 279037 279149 279218 279372 279752 279858 283289 pf4 52 pf4_1:285541w|pfd0255w pf4_1:285541w pfd0255w chr4_1.glm_75+76|24oct01 vbc 9 1722 285541 285652 285769 285909 286088 286274 286376 286434 286529 286692 286936 287059 287198 287457 287681 287768 287866 288452 pf4 53 pf4_1:288872c|pfd0260c pf4_1:288872c pfd0260c chr4_1.glm_77|24oct01 glm 1 5895 288872 294766 pf4 54 pf4_1:297721w|pfd0265w pf4_1:297721w pfd0265w chr4_1.glm_79|24oct01 glm 2 9411 297721 297771 298087 307446 pf4 55 pf4_1:307729c|pfd0270c pf4_1:307729c pfd0270c chr4_1.glm_80|24oct01 vbc 3 675 307729 307918 308044 308243 308453 308737 pf4 56 pf4_1:309799w|pfd0275w+pfd0280w pf4_1:309799w pfd0275w+pfd0280w chr4_1.glm_81|24oct01 vbc 9 948 309799 309835 309945 310264 310450 310567 310787 310928 311023 311065 311189 311316 311401 311450 311570 311634 311771 311815 pf4 57 pf4_1:312218c|pfd0285c pf4_1:312218c pfd0285c chr4_1.glm_82|24oct01 glm 1 7248 312218 319465 pf4 58 pf4_1:322031w|pfd0290w pf4_1:322031w pfd0290w chr4_1.glm_83|24oct01 glm 1 312 322031 322342 pf4 59 pf4_1:323012c|pfd0295c pf4_1:323012c pfd0295c chr4_1.glm_84|24oct01 vbc 4 2196 323012 324546 324682 325101 325215 325302 325498 325650 pf4 60 pf4_1:327491w|pfd0300w pf4_1:327491w pfd0300w chr4_1.glm_85+chrblob_4040|24oct01 vbc 1 1527 327491 329017 pf4 61 pf4_1:329739c|olim pf4_1:329739c olim pfd0305c chrblob_4040.glm_1+2|24oct01 vbc v-atp subunit v-atp subunit 2 1485 329739 331114 331590 331698 pf4 62 pf4_1:335693w|pfd0310w pf4_1:335693w pfd0310w chr4_1.glm_86|24oct01 glm 1 474 335693 336166 pf4 63 pf4_1:338520w|extra pf4_1:338520w extra ordine pfd0311w chr4_1.glm_87|24oct01 vbc 7 792 338520 338525 338805 338869 339046 339091 339174 339249 339377 339490 339654 339918 340114 340333 pf4 64 pf4_1:340759c|pfd0320c pf4_1:340759c pfd0320c chr4_1.glm_88|24oct01=pfmal4p2.1c glm 2 10077 (ry)n s t a r t 340759 340943 341081 350972 pf4 65 pf4_1:353226w|pfd0325w pf4_1:353226w pfd0325w chr4_1.glm_89|24oct01=pfmal4p2.2w sanger 1 420 353226 353645 pf4 66 pf4_1:354376w|pfd0330w pf4_1:354376w pfd0330w chr4_1.glm_91+93+94+95=pfmal4p2.3w|24oct01 vbc 13 2601 354376 354439 354524 354657 354854 354977 355148 355245 355374 355646 355733 355939 356036 356122 356220 357203 357322 357600 357752 357832 357922 357960 358088 358253 358358 358422 pf4 67 pf4_1:358450c|pfd0335c pf4_1:358450c pfd0335c chr4_1.glm_96|24oct01=pfmal4p2.4c vbc 5 861 358450 358554 358670 358759 358949 359199 359309 359389 359573 359906 pf4 68 pf4_1:360578c|pfd0340c|30oct00 pf4_1:360578c pfd0340c|30oct00 chr4_1.glm_97|24oct01=pfmal4p2.5c vbc 8 5298 occam's razor 360578 360603 360690 360780 360894 361007 361109 365677 365918 366349 366467 366492 366585 366619 366797 366801 pf4 69 pf4_1:367471c|pfd0345c pf4_1:367471c pfd0345c chr4_1.glm_98|24oct01=pfmal4p2.6c sanger 1 1218 367471 368688 pf4 70 pf4_1:369225w|pfd0350w pf4_1:369225w pfd0350w chr4_1.glm_99|24oct01=pfmal4p2.7w vbc 2 1002 369225 369251 369392 370366 pf4 71 pf4_1:370523c|pfd0355c pf4_1:370523c pfd0355c chr4_1.glm_100+101|24oct01=pfmal4p2.8c sanger 5 570 370523 370572 370729 370780 370987 371061 371321 371499 371644 371857 pf4 72 pf4_1:373303w|pfd0360w pf4_1:373303w pfd0360w chr4_1.glm_102|24oct01=pfmal4p2.7w sanger 1 963 occam's razor 373303 374265 pf4 73 pf4_1:377250w|olim pf4_1:377250w olim pfd0370w chr4_1.glm_104+chrblob_3979|24oct01=pfmal4p2.11w vbc 1 945 occam's razor 377250 378194 pf4 74 pf4_1:379964w|pfd0375w pf4_1:379964w pfd0375w chr4_1.glm_105|24oct01=pfmal4p2.12w sanger 1 3639 379964 383602 pf4 75 pf4_1:384406c|pfd0380c pf4_1:384406c pfd0380c chr4_1.glm_106|24oct01=pfmal4p2.13c sanger 6 4890 384406 384474 384572 384672 384773 384899 385118 385259 385370 389759 389954 390014 pf4 76 pf4_1:391851w|pfd0385w pf4_1:391851w pfd0385w chr4_1.glm_107|24oct01=pfmal4p2.14w sanger 1 5883 391851 397733 pf4 77 pf4_1:398274c|olim pf4_1:398274c olim pfd0390c chr4_1.glm_107.1|24oct01=pfmal4p2.15c sanger 1 2001 398274 400274 pf4 78 pf4_1:400991c|pfd0395c pf4_1:400991c pfd0395c chr4_1.glm_108|24oct01=pfmal4p2.16c sanger 1 516 400991 401506 pf4 79 pf4_1:404254w|pfd0400w pf4_1:404254w pfd0400w chr4_1.glm_110|24oct01=pfmal4p2.17w sanger 1 3336 404254 407589 pf4 80 pf4_1:408361w|pfd0405w pf4_1:408361w pfd0405w chr4_1.glm_111|24oct01=pfmal4p2.18w sanger 1 1869 408361 410229 pf4 81 pf4_1:410521c|olim pf4_1:410521c olim pfd0410c chr4_1.glm_112|24oct01=pfmal4p2.19c sanger 5 1035 410521 411149 411258 411530 411661 411731 411894 411933 412240 412261 pf4 82 pf4_1:413132c|pfd0415c pf4_1:413132c pfd0415c chr4_1.glm_113|24oct01 sanger 3 1416 413132 413206 413339 413558 413686 414806 pf4 83 pf4_1:415576c|pfd0420c pf4_1:415576c pfd0420c chr4_1.glm_114|24oct01=pfmal4p2.21c sanger 1 2019 415576 417594 pf4 84 pf4_1:420300w|pfd0425w pf4_1:420300w pfd0425w chr4_1.glm_115|24oct01=pfmal4p2.22w sanger 1 2955 420300 423254 pf4 85 pf4_1:424269c|pfd0430c pf4_1:424269c pfd0430c chr4_1.glm_116+117|24oct01=pfmal4p2.23c sanger 8 2529 424269 424639 424748 425144 425269 425696 425831 426021 426120 426328 426508 426947 427095 427289 427424 427721 pf4 86 pf4_1:428908c|pfd0435c pf4_1:428908c pfd0435c chr4_1.glm_118|24oct01=pfmal4p2.24c sanger 1 948 428908 429855 pf4 87 pf4_1:431197w|pfd0440w pf4_1:431197w pfd0440w chr4_1.glm_119+120|24oct01=pfmal4p2.25w sanger 5 2082 431197 431647 431818 432670 432959 433506 433726 433819 433956 434091 pf4 88 pf4_1:434561c|pfd0445c pf4_1:434561c pfd0445c chr4_1.glm_121|24oct01=pfmal4p2.26c sanger 1 7704 434561 442264 pf4 89 pf4_1:443114c|pfd0450c pf4_1:443114c pfd0450c chr4_1.glm_122|24oct01=pfmal4p2.27c sanger 2 1701 443114 444715 444780 444878 pf4 90 pf4_1:445784w|pfd0455w pf4_1:445784w pfd0455w chr4_1.glm_122.1|24oct01=pfmal4p2.28w sanger 1 1449 445784 447232 pf4 91 pf4_1:447865c|pfd0460c pf4_1:447865c pfd0460c chr4_1.glm_123|24oct01=pfmal4p2.29c sanger 3 3033 447865 447939 448044 448127 448266 451139 pf4 92 pf4_1:452897w|pfd0465w pf4_1:452897w pfd0465w chr4_1.glm_124|24oct01=pfmal4p2.30w sanger 1 2019 452897 454915 pf4 93 pf4_1:456086c|bis pf4_1:456086c bis pfd0465c chr4_1.glm_126|24oct01=pfmal4p2.31c sanger 2 1197 456086 457062 457311 457530 pf4 94 pf4_1:459031c|pfd0470c pf4_1:459031c pfd0470c chr4_1.glm_127|24oct01=pfmal4p2.32c vbc 1 3435 459031 462465 pf4 95 pf4_1:463755w|pfd0480w pf4_1:463755w pfd0480w chr4_1.glm_128|24oct01=pfmal4p2.33w sanger 5 549 463755 463776 463877 463908 464090 464361 464522 464621 464795 464917 pf4 96 pf4_1:466607w|pfd0485w pf4_1:466607w pfd0485w chr4_1.glm_129|24oct01=pfmal4p2.34w vbc 1 1728 466607 468334 pf4 97 pf4_1:468888c|olim pf4_1:468888c olim pfd0490c chr4_1.glm_130|24oct01=pfmal4p2.35c vbc 7 1251 468888 469618 469753 469924 470053 470159 470251 470344 470468 470498 470654 470719 470805 470854 pf4 98 pf4_1:471629c|pfd0495c pf4_1:471629c pfd0495c chr4_1.glm_131|24oct01=pfmal4p2.36c sanger 2 2502 471629 474038 474145 474236 pf4 99 pf4_1:476115w|olim pf4_1:476115w olim pfd0500w sanger trna-ser-tct trna-ser-tct 1 82 476115 476196 pf4 100 pf4_1:476755c|olim pf4_1:476755c olim pfd0505c sanger trna-ile-ata trna-ile-ata 1 73 476755 476827 pf4 101 pf4_1:477425c|olim pf4_1:477425c olim pfd0510c chr4_1.glm_132|24oct01=pfmal4p2.37c sanger 2 2721 may initiate on atg at codon 3 alternative sanger e x o n violates ag rule 477425 477464 477813 480493 pf4 102 pf4_1:481442w|pfd0515w pf4_1:481442w pfd0515w chr4_1.glm_133|24oct01=pfmal4p2.38w vbc 1 1014 481442 482455 pf4 103 pf4_1:482841c|pfd0520c pf4_1:482841c pfd0520c chr4_1.glm_133.1|24oct01=pfmal4p2.39c sanger 1 642 482841 483482 pf4 104 pf4_1:485925w|pfd0525w pf4_1:485925w pfd0525w chr4_1.glm_134|24oct01=pfmal4p2.40w sanger 3 981 485925 485976 486185 487049 487302 487365 pf4 105 pf4_1:488074c|pfd0530c pf4_1:488074c pfd0530c chr4_1.glm_135|24oct01=pfmal4p2.41c sanger 1 2715 488074 490788 pf4 106 pf4_1:492729w|pfd0535w pf4_1:492729w pfd0535w chr4_1.glm_136|24oct01=pfmal4p2.42w sanger 1 3897 492729 496625 pf4 107 pf4_1:497339c|pfd0540c pf4_1:497339c pfd0540c chr4_1.glm_136.1|24oct01=pfmal4p2.43c sanger 1 2934 cnn before atg ok 497339 500272 pf4 108 pf4_1:506065w|pfd0545w pf4_1:506065w pfd0545w chr4_1.glm_137.1|24oct01=pfmal4p2.44w sanger 1 4713 506065 510777 pf4 109 pf4_1:511375c|olim pf4_1:511375c olim pfd0550c chr4_1.glm_137.2|24oct01=pfmal4p2.45c sanger 1 615 511375 511989 pf4 110 pf4_1:512830c|pfd0555c pf4_1:512830c pfd0555c chr4_1.glm_138|24oct01=pfmal4p2.46c sanger 1 3738 512830 516567 pf4 111 pf4_1:517280w|olim pf4_1:517280w olim pfd0560w chr4_1.glm_139|24oct01=pfmal4p2.47w vbc 1 2166 517280 519445 pf4 112 pf4_1:520051c|pfd0565c pf4_1:520051c pfd0565c chr4_1.glm_140|24oct01=pfmal4p2.48c sanger 1 3915 520051 523965 pf4 113 pf4_1:524619w|olim pf4_1:524619w olim pfd0570w|30oct00 sanger trna-ala-gca trna-ala-gca 1 72 524619 524690 pf4 114 pf4_1:525051c|pfd0575c|30oct00 pf4_1:525051c pfd0575c|30oct00 sanger trna-glu-gag trna-glu-gag 1 72 525051 525122 pf4 115 pf4_1:525582c|pfd0580c pf4_1:525582c pfd0580c chr4_1.glm_141|24oct01=pfmal4p2.49c sanger 1 417 525582 525998 pf4 116 pf4_1:526729c|pfd0585c pf4_1:526729c pfd0585c chr4_1.glm_142|24oct01=pfmal4p2.50c sanger 1 5787 526729 532515 pf4 117 pf4_1:535089c|pfd0590c pf4_1:535089c pfd0590c chr4_1.glm_143|24oct01=pfmal4p2.51c sanger L19895 L19895 5 5739 L19895 = chr678_4111.glm_1 15oct01 has shorter i n t r o n s 1 and 2 535089 536514 536697 540777 540887 540958 541098 541188 541314 541382 pf4 118 pf4_1:543671w|pfd0595w pf4_1:543671w pfd0595w chr4_1.glm_144|24oct01=pfmal4p2.52w sanger 1 2337 543671 546007 pf4 119 pf4_1:547085c|pfd0600c pf4_1:547085c pfd0600c chr4_1.glm_145|24oct01=pfmal4p2.53c sanger 1 1011 547085 548095 pf4 120 pf4_1:548708c|pfd0605c pf4_1:548708c pfd0605c chr4_1.glm_146|24oct01=pfmal4p2.54c sanger 1 999 548708 549706 pf4 121 pf4_1:550522w|pfd0610w pf4_1:550522w pfd0610w chr4_1.glm_147|24oct01=pfmal4p2.55w sanger 1 1623 550522 552144 pf4 122 pf4_1:552884c|pfd0615c pf4_1:552884c pfd0615c chr4_1.glm_148+149|24oct01=pfmal4p2.56c sanger pfemp1 var pfemp1 var 2 6630 552884 554221 555416 560707 pf4 123 pf4_1:564302c|ante pf4_1:564302c ante pfd0615c vbc nc-rna pfemp1 putative promoter nc-rna pfemp1 putative promoter 1 194 564302 564495 pf4 124 pf4_1:566507c|olim pf4_1:566507c olim pfd0620c chr4_1.glm_151|24oct01=pfmal4p2.57c vbc stevor pseudogene stevor pseudogene 2 852 taa at 567190 566507 567289 567467 567535 pf4 125 pf4_1:568564c|olim pf4_1:568564c olim pfd0625c chr4_1.glm_152|24oct01=pfmal4p2.58c sanger pfemp1 var pfemp1 var 2 6834 568564 569898 570741 576239 pf4 126 pf4_1:580131c|ante pf4_1:580131c ante pfd0625c vbc nc-rna pfemp1 putative promoter nc-rna pfemp1 putative promoter 1 193 580131 580323 pf4 127 pf4_1:583793c|pfd0630c pf4_1:583793c pfd0630c chr4_1.glm_153|24oct01 vbc pfemp1 var pfemp1 var 2 6939 copy of 600353..598932 583793 585214 586135 591651 pf4 128 pf4_1:595356c|ante pf4_1:595356c ante pfd0630c vbc nc-rna pfemp1 putative promoter nc-rna pfemp1 putative promoter 1 193 595356 595548 pf4 129 pf4_1:598932c|olim pf4_1:598932c olim pfd0635c chr4_1.glm_154+chrblob_4240|24oct01 vbc pfemp1 var pfemp1 var 2 6981 598932 600353 601274 606832 pf4 130 pf4_1:610149c|pfd0640c pf4_1:610149c pfd0640c chr4_1.glm_155|24oct01 glm stevor stevor 2 1131 610149 611210 611371 611439 pf4 131 pf4_1:616138w|olim pf4_1:616138w olim pfd0645c chr4_1.glm_156|24oct01 vbc stevor stevor 2 1041 25 aa's 616138 616212 616451 617416 pf4 132 pf4_1:618860w|pfd0650w+pfd0655w pf4_1:618860w pfd0650w+pfd0655w chr4_1.glm_157+158+159|24oct01 vbc pseudogene pseudogene 1 2468 619004w [TA] | 619087 [A] | 619169 [A] | 619209 [A] | 619318 [A] | 619472 [A] | 619542 [A] | 619822 [A] | 620075 [A] | 620688 [A] | 620863 [T] | 620903 [A] | 621030 [T] 618860 621327 pf4 133 pf4_1:622339w|pfd0660w|03oct02 pf4_1:622339w pfd0660w|03oct02 sanger 1 888 622339 623226 pf4 134 pf4_1:623897c|pfd0665c pf4_1:623897c pfd0665c chr4_1.glm_160|24oct01 glm 2 1179 623897 624985 625244 625333 pf4 135 pf4_1:626769c|pfd0670c pf4_1:626769c pfd0670c chr4_1.glm_161|24oct01 glm 1 1017 626769 627785 pf4 136 pf4_1:629077w|pfd0675w pf4_1:629077w pfd0675w chr4_1.glm_162|24oct01 glm 1 843 629077 629919 pf4 137 pf4_1:630151c|olim pf4_1:630151c olim pfd0680c chr4_1.glm_163|24oct01 vbc 4 2562 630151 630244 630393 630480 630663 632944 633112 633209 pf4 138 pf4_1:633874c|pfd0685c pf4_1:633874c pfd0685c chr4_1.glm_164+165|24oct01 vbc 21 3582 633874 633900 634113 634221 634326 634376 634547 634676 634816 634902 635012 635102 635207 635314 635430 635503 635602 635662 635769 635889 636051 636175 636277 636324 636462 636554 636694 637215 637364 637750 637856 637977 638106 638208 638325 638447 638596 638709 638858 639855 640020 640107 pf4 139 pf4_1:641010c|pfd0690c pf4_1:641010c pfd0690c chr4_1.glm_166|24oct01 vbc 4 4458 641010 641269 641420 641519 641631 641696 641855 645886 pf4 140 pf4_1:654372c|bis pf4_1:654372c bis pfd0690c chr4_1.glm_167|24oct01 vbc 5 453 654372 654387 654489 654591 654719 654889 655074 655206 655342 655371 pf4 141 pf4_1:656996c|extra pf4_1:656996c extra ordine pfd0669w|03oct02 vbc 4 354 656996 657046 657127 657311 657435 657477 657640 657714 pf4 142 pf4_1:659333w|pfd0695w pf4_1:659333w pfd0695w chr4_1.glm_169|24oct01 glm 2 993 659333 659399 659612 660537 pf4 143 pf4_1:662008.1c|olim pf4_1:662008.1c olim pfd0700c chr4_1.glm_170+171+chrblob_3800|24oct01|alt1 vbc 8 1092 alt1 depends on binding factor upstream of e x o n 4 alt2 has no e x o n 4 or may initiate @ 664165 ag splice site downstream 662008 662221 662342 662415 662542 662683 662863 662990 663130 663264 663434 663531 663650 663757 664105 664297 pf4 144 pf4_1:662008.2c|chr4_1.glm_170+171|24oct01|alt pf4_1:662008.2c chr4_1.glm_170+171|24oct01|alt2 vbc 5 594 662008 662221 662342 662415 662542 662683 662863 662990 663130 663165 pf4 145 pf4_1:665603c|pfd0705c pf4_1:665603c pfd0705c chr4_1.glm_172|24oct01 vbc 2 708 665603 666223 666435 666521 pf4 146 pf4_1:667607w|pfd0710w pf4_1:667607w pfd0710w chr4_1.glm_173|24oct01 glm 1 1896 667607 669502 pf4 147 pf4_1:670399c|pfd0715c pf4_1:670399c pfd0715c chr4_1.glm_174|24oct01 vbc 1 597 670399 670995 pf4 148 pf4_1:672956w|pfd0720w pf4_1:672956w pfd0720w chr4_1.glm_175|24oct01 vbc 11 828 672956 672985 673107 673182 673321 673403 673576 673675 673802 673875 673957 674011 674112 674237 674387 674453 674565 674640 674740 674820 675071 675130 pf4 149 pf4_1:675561c|pfd0725c pf4_1:675561c pfd0725c chr4_1.glm_176|24oct01 glm 1 1140 675561 676700 pf4 150 pf4_1:677866w|pfd0730w|03oct02 pf4_1:677866w pfd0730w|03oct02 sanger 1 1242 677866 679107 pf4 151 pf4_1:679483c|pfd0735c pf4_1:679483c pfd0735c chr4_1.glm_177|24oct01 glm 1 6639 679483 686121 pf4 152 pf4_1:688793w|pfd0740w pf4_1:688793w pfd0740w chr4_1.glm_179|24oct01 vbc 2 4020 688793 691805 691945 692951 pf4 153 pf4_1:693397c|pfd0745c pf4_1:693397c pfd0745c chr4_1.glm_180|24oct01 glm 1 627 693397 694023 pf4 154 pf4_1:695175w|pfd0750w pf4_1:695175w pfd0750w chr4_1.glm_181|24oct01 vbc 2 705 695175 695330 695488 696036 pf4 155 pf4_1:696623c|pfd0755c pf4_1:696623c pfd0755c chr4_1.glm_182|24oct01 glm 1 690 696623 697312 pf4 156 pf4_1:698114c|pfd0760c pf4_1:698114c pfd0760c chr4_1.glm_183|24oct01 glm 1 1386 698114 699499 pf4 157 pf4_1:700889w|pfd0765w pf4_1:700889w pfd0765w chr4_1.glm_184|24oct01 vbc 1 2628 700889 703516 pf4 158 pf4_1:704901c|olim pf4_1:704901c olim pfd0770c chr4_1.glm_185|24oct01 glm 2 618 704901 705426 705660 705751 pf4 159 pf4_1:708509c|pfd0775c pf4_1:708509c pfd0775c chr4_1.glm_186|24oct01 vbc 7 1773 708509 708564 708670 708733 708901 708990 709131 709234 709459 709551 709646 709807 709942 711145 pf4 160 pf4_1:713512w|pfd0780w pf4_1:713512w pfd0780w chr4_1.glm_187|24oct01 glm 1 2481 713512 715992 pf4 161 pf4_1:716443c|pfd0785c pf4_1:716443c pfd0785c chr4_1.glm_188|24oct01 glm 1 624 716443 717066 pf4 162 pf4_1:718075c|pfd0790c pf4_1:718075c pfd0790c chr4_1.glm_189|24oct01 glm 1 4398 718075 722472 pf4 163 pf4_1:725185w|pfd0795w pf4_1:725185w pfd0795w chr4_1.glm_190|24oct01 vbc 2 3705 725185 725472 725586 729002 pf4 164 pf4_1:730056c|pfd0800c|03oct02 pf4_1:730056c pfd0800c|03oct02 sanger 1 1170 730056 731225 pf4 165 pf4_1:733248w|pfd0805w pf4_1:733248w pfd0805w chr4_1.glm_191|24oct01 vbc 1 864 733248 734111 pf4 166 pf4_1:734693c|bis pf4_1:734693c bis pfd0805c chr4_1.glm_192|24oct01 glm 1 270 734693 734962 pf4 167 pf4_1:737741w|pfd0810w pf4_1:737741w pfd0810w chr4_1.glm_193|24oct01 glm 1 465 737741 738205 pf4 168 pf4_1:739434c|pfd0815c pf4_1:739434c pfd0815c chr4_1.glm_194|24oct01 vbc 2 7269 739434 739484 739637 746854 pf4 169 pf4_1:749130w|pfd0820w pf4_1:749130w pfd0820w chr4_1.glm_195|24oct01 vbc 3 882 749130 749661 749777 750066 750207 750266 pf4 170 pf4_1:750592c|pfd0825c pf4_1:750592c pfd0825c chr4_1.glm_196|24oct01 vbc 4 1545 750592 750632 750757 750902 751028 751114 751348 752618 pf4 171 pf4_1:755072w|olim pf4_1:755072w olim pfd0830w chr4_1.glm_197|24oct01 vbc 1 1824 755072 756895 pf4 172 pf4_1:757841c|pfd0835c pf4_1:757841c pfd0835c chr4_1.glm_198|24oct01 vbc 4 2409 757841 757900 758108 758202 758319 758374 758496 760693 pf4 173 pf4_1:763275w|pfd0840w+pfd0845w pf4_1:763275w pfd0840w+pfd0845w chr4_1.glm_199|24oct01 glm 1 20310 763275 783584 pf4 174 pf4_1:784181c|olim pf4_1:784181c olim pfd0850c|03oct02 vbc 14 945 784181 784249 784371 784424 784531 784601 784757 784805 784925 784985 785095 785173 785318 785388 785508 785628 785739 785851 785932 786000 786144 786225 786368 786391 786496 786536 786639 786679 pf4 175 pf4_1:787231c|pfd0855c pf4_1:787231c pfd0855c chr4_1.glm_200+201|24oct01 vbc 4 2424 may be expressed as two genes, the second beginning at 788955 787231 788989 789319 789794 789949 790061 790152 790227 pf4 176 pf4_1:791175w|pfd0860w pf4_1:791175w pfd0860w chr4_1.glm_202|24oct01 vbc 6 1575 791175 791275 791430 791502 791634 791717 791792 791897 792038 792072 792236 793411 pf4 177 pf4_1:794224c|pfd0865c pf4_1:794224c pfd0865c chr4_1.glm_203|24oct01 glm 1 2100 794224 796323 pf4 178 pf4_1:797705w|olim pf4_1:797705w olim pfd0870w chr4_1.glm_204|24oct01 glm 1 2262 797705 799966 pf4 179 pf4_1:800808w|pfd0846w pf4_1:800808w pfd0846w chr4_1.glm_205+206+207|24oct01 vbc 10 14676 800808 802122 802320 804826 805044 805156 805289 805407 805703 805899 806054 808267 808426 810950 811150 816667 816786 816863 816962 817051 pf4 180 pf4_1:817976c|pfd0875c pf4_1:817976c pfd0875c chr4_1.glm_208|24oct01 glm 1 3648 817976 821623 pf4 181 pf4_1:824381w|pfd0880w pf4_1:824381w pfd0880w chr4_1.glm_209|24oct01 glm 1 1290 824381 825670 pf4 182 pf4_1:826343c|pfd0885c pf4_1:826343c pfd0885c chr4_1.glm_210|24oct01 glm 1 2979 826343 829321 pf4 183 pf4_1:836943w|pfd0890w pf4_1:836943w pfd0890w pfd0890w|03oct02 sanger complement complement 3 330 836943 837023 837235 837364 837456 837574 pf4 184 pf4_1:837969c|pfd0895c pf4_1:837969c pfd0895c chr4_1.glm_212|24oct01 vbc 6 564 837969 838007 838203 838286 838492 838674 838904 839003 839100 839197 839349 839408 pf4 185 pf4_1:841374w|pfd0900w pf4_1:841374w pfd0900w chr4_1.glm_213|24oct01 glm 1 6036 841374 847409 pf4 186 pf4_1:848176w|pfd0905w pf4_1:848176w pfd0905w chr4_1.glm_214|24oct01 glm 1 1710 848176 849885 pf4 187 pf4_1:850542w|pfd0910w pf4_1:850542w pfd0910w chr4_1.glm_215|24oct01 vbc 9 786 850542 850644 850770 850967 851074 851137 851239 851402 851479 851577 851675 851694 851783 851826 851923 851984 852118 852149 pf4 188 pf4_1:854211w|pfd0915w pf4_1:854211w pfd0915w chr4_1.glm_217|24oct01 vbc 6 1251 854211 855092 855311 855427 855533 855623 855741 855835 856030 856069 856214 856239 pf4 189 pf4_1:856773w|pfd0920w pf4_1:856773w pfd0920w chr4_1.glm_218|24oct01 vbc 10 1308 856773 856850 856973 857050 857142 857450 857623 857883 858001 858060 858214 858305 858476 858577 858690 858795 858870 858949 859081 859222 pf4 190 pf4_1:859490w|pfd0925w pf4_1:859490w pfd0925w chr4_1.glm_220|24oct01 vbc 2 834 (ry)8 near e n d 859490 859850 860074 860546 pf4 191 pf4_1:861859w|pfd0930w pf4_1:861859w pfd0930w chr4_1.glm_221|24oct01 glm 1 411 861859 862269 pf4 192 pf4_1:862878c|pfd0935c pf4_1:862878c pfd0935c chr4_1.glm_222|24oct01 vbc 2 1041 862878 863859 863971 864029 pf4 193 pf4_1:864978w|pfd0940w pf4_1:864978w pfd0940w chr4_1.glm_223|24oct01 vbc 4 7419 864978 871208 871330 871686 871885 872393 872616 872937 pf4 194 pf4_1:873481c|pfd0945c pf4_1:873481c pfd0945c chr4_1.glm_224|24oct01 glm 1 1611 873481 875091 pf4 195 pf4_1:877717w|pfd0950w|03oct02 pf4_1:877717w pfd0950w|03oct02 sanger 2 843 877717 877785 878080 878853 pf4 196 pf4_1:880118w|pfd0955w pf4_1:880118w pfd0955w chr4_1.glm_226|24oct01 vbc 1 978 880118 881095 pf4 197 pf4_1:881791c|pfd0960c pf4_1:881791c pfd0960c chr4_1.glm_227|24oct01 glm 1 711 881791 882501 pf4 198 pf4_1:885004w|olim pf4_1:885004w olim pfd0965w chr4_1.glm_228+229|24oct01 vbc 6 15107 frameshift near 894507 894506w [AA] 885004 885039 885146 885267 885469 900055 900209 900332 900457 900561 900715 900847 pf4 199 pf4_1:901593c|pfd0970c pf4_1:901593c pfd0970c chr4_1.glm_230|24oct01 glm 1 10113 901593 911705 pf4 200 pf4_1:914037w|pfd0975w pf4_1:914037w pfd0975w chr4_1.glm_231|24oct01 glm 1 1746 914037 915782 pf4 201 pf4_1:917168w|pfd0980w pf4_1:917168w pfd0980w chr4_1.glm_232|24oct01 vbc 1 1785 917168 918952 pf4 202 pf4_1:924970w|pfd0985w pf4_1:924970w pfd0985w chr4_1.glm_233+234|24oct01 vbc 1 10422 924970 935391 pf4 203 pf4_1:936320w|pfd0990w pf4_1:936320w pfd0990w chr4_1.glm_235|24oct01 vbc 1 801 936320 937120 pf4 204 pf4_1:939470c|pfd0995c pf4_1:939470c pfd0995c chr4_2.glm_1|24oct01 glm pfemp1 var pfemp1 var 2 6459 939470 940774 941161 946314 pf4 205 pf4_1:949339c|ante pf4_1:949339c ante pfd0995c vbc nc-rna pfemp1 putative promoter nc-rna pfemp1 putative promoter 1 193 949339 949531 pf4 206 pf4_1:950608c|olim pf4_1:950608c olim pfd1000c chr4_2.glm_2+3|24oct01 vbc pfemp1 var pfemp1 var 2 6606 950608 951870 952870 958212 pf4 207 pf4_1:961237c|ante pf4_1:961237c ante olim pfd1000c vbc nc-rna pfemp1 putative promoter nc-rna pfemp1 putative promoter 1 193 961237 961429 pf4 208 pf4_1:962506c|olim pf4_1:962506c olim pfd1005c chr4_2.glm_4+5|24oct01 vbc pfemp1 var pfemp1 var 2 6546 962506 963768 964768 970050 pf4 209 pf4_1:971526.1w|pfd1010w pf4_1:971526.1w pfd1010w chr4_2.glm_6|24oct01|alt1 vbc rifin rifin 2 1026 971526 971579 971741 972712 pf4 210 pf4_1:971526.2w|pfd1010w pf4_1:971526.2w pfd1010w chr4_2.glm_6|24oct01|alt2 glm stevor stevor 2 1041 971526 971594 971741 972712 pf4 211 pf4_1:973470c|olim pf4_1:973470c olim pfd1015c chr4_2.glm_7|24oct01 vbc pfemp1 var pfemp1 var 2 6582 973470 974750 975730 981030 pf4 212 pf4_1:984305c|ante pf4_1:984305c ante olim pfd1015c vbc nc-rna pfemp1 putative promoter nc-rna pfemp1 putative promoter 1 194 984305 984498 pf4 213 pf4_1:986171c|pfd1020c pf4_1:986171c pfd1020c chr4_2.glm_9|24oct01 vbc stevor pseudogene stevor pseudogene 2 1123 986246c [T] 986171 987224 987366 987434 pf4 214 pf4_1:990355w|pfd1025w pf4_1:990355w pfd1025w chr4_2.glm_10+11+12+13|24oct01 vbc pseudogene pseudogene 2 1482 frameshifts near 990777, 991227, 991491, and 991884 990776w [AC] | 991225 [A] | 991490 [GA] | 991882 [T] 990355 990369 990575 992041 pf4 215 pf4_1:992282c|extra pf4_1:992282c extra ordine pfd1004c+pfd1030c chr4_2.glm_14+15|24oct01 vbc 6 5823 992282 992405 992547 992736 992835 992917 993091 993354 993452 993558 993746 998800 pf4 216 pf4_1:1003075w|pfd1035w pf4_1:1003075w pfd1035w chr4_3.glm_2|24oct01 vbc 5 999 1003075 1003209 1003402 1003734 1003850 1003940 1004091 1004221 1004317 1004625 pf4 217 pf4_1:1006053w|olim pf4_1:1006053w olim pfd1040w chr4_3.glm_3|24oct01 glm 1 1158 1006053 1007210 pf4 218 pf4_1:1008902c|pfd1045c pf4_1:1008902c pfd1045c chr4_3.glm_4|24oct01 vbc 1 12798 1008902 1021699 pf4 219 pf4_1:1026927w|pfd1050w pf4_1:1026927w pfd1050w chr4_3.glm_5|24oct01 glm 3 1353 1026927 1026988 1027197 1027317 1027437 1028606 pf4 220 pf4_1:1031088w|pfd1055w pf4_1:1031088w pfd1055w chr4_3.glm_6|24oct01 vbc 2 513 1031088 1031090 1031330 1031839 pf4 221 pf4_1:1033769w|pfd1060w pf4_1:1033769w pfd1060w chr4_3.glm_7|24oct01 glm 1 8625 1033769 1042393 pf4 222 pf4_1:1043137c|pfd1065c pf4_1:1043137c pfd1065c chr4_3.glm_8|24oct01 glm 1 423 1043137 1043559 pf4 223 pf4_1:1044910w|pfd1070w pf4_1:1044910w pfd1070w chr4_3.glm_9|24oct01 glm 1 1173 1044910 1046082 pf4 224 pf4_1:1047004w|olim pf4_1:1047004w olim pfd1075w chr4_3.glm_10|24oct01 vbc 7 1422 1047004 1047706 1047896 1048303 1048412 1048453 1048581 1048665 1048829 1048888 1049010 1049059 1049263 1049336 pf4 225 pf4_1:1049821w|pfd1080w pf4_1:1049821w pfd1080w chr4_3.glm_11|03oct02 sanger 4 729 1049821 1049989 1050086 1050208 1050558 1050745 1050888 1051136 pf4 226 pf4_1:1052136w|pfd1085w pf4_1:1052136w pfd1085w chr4_3.glm_12|24oct01 vbc 1 783 1052136 1052918 pf4 227 pf4_1:1053710c|pfd1090c pf4_1:1053710c pfd1090c chr4_3.glm_12.1=my433bg6.glm_13 vbc 2 441 1053710 1053968 1054153 1054334 pf4 228 pf4_1:1054847w|pfd1095w pf4_1:1054847w pfd1095w chr4_3.glm_13|24oct01 vbc 2 411 1054847 1054907 1055065 1055414 pf4 229 pf4_1:1056016c|pfd1100c pf4_1:1056016c pfd1100c chr4_3.glm_14|24oct01 glm 1 1431 1056016 1057446 pf4 230 pf4_1:1060105w|pfd1105w pf4_1:1060105w pfd1105w chr4_3.glm_17|24oct01 glm 1 654 1060105 1060758 pf4 231 pf4_1:1063436w|pfd1110w pf4_1:1063436w pfd1110w chr4_3.glm_18+19|24oct01 vbc 2 1119 1063436 1064120 1064557 1064990 pf4 232 pf4_1:1066229c|pfd1115c pf4_1:1066229c pfd1115c chr4_3.glm_20|24oct01 glm 1 4839 1066229 1071067 pf4 233 pf4_1:1075873c|pfd1120c pf4_1:1075873c pfd1120c chr4_3.glm_21|24oct01 glm qimr:ts etramp etramp 1 411 1075873 1076283 pf4 234 pf4_1:1080786w|pfd1130w pf4_1:1080786w pfd1130w chr4_3.glm_23|24oct01 vbc 2 1089 1080786 1081411 1081511 1081973 pf4 235 pf4_1:1082365c|pfd1135c pf4_1:1082365c pfd1135c chr4_3.glm_24|24oct01 vbc 2 423 1082365 1082598 1082739 1082927 pf4 236 pf4_1:1085398w|pfd1140w pf4_1:1085398w pfd1140w chr4_3.glm_25|24oct01 glm 2 1044 normal splicing at 1085665 truncates gene 1085398 1085481 1085669 1086628 pf4 237 pf4_1:1086802c|pfd1145c pf4_1:1086802c pfd1145c chr4_3.glm_26|24oct01 vbc 2 1581 1086802 1088318 1088526 1088589 pf4 238 pf4_1:1090419c|pfd1150c pf4_1:1090419c pfd1150c chr4_3.glm_27|24oct01 vbc 2 5151 1090419 1095514 1095663 1095717 pf4 239 pf4_1:1097578w|pfd1155w pf4_1:1097578w pfd1155w chr4_3.glm_29+30|24oct01 vbc 5 4362 frameshifts near 1097792 and 1098782 1097791w [AA] | 1098780 [A] 1097578 1101598 1101768 1101846 1101987 1102120 1102214 1102263 1102443 1102520 pf4 240 pf4_1:1104251w|pfd1160w pf4_1:1104251w pfd1160w chr4_3.glm_31|24oct01 glm 2 7143 1104251 1106542 1106701 1111551 pf4 241 pf4_1:1113689w|pfd1165w pf4_1:1113689w pfd1165w chr4_3.glm_32|24oct01 vbc 3 1869 1113689 1113790 1114012 1115703 1115848 1115922 pf4 242 pf4_1:1116974c|pfd1170c pf4_1:1116974c pfd1170c chr4_3.glm_33+34|24oct01 vbc 2 930 1116974 1117714 1117927 1118115 pf4 243 pf4_1:1122059w|pfd1175w pf4_1:1122059w pfd1175w chr4_3.glm_35|24oct01 vbc 3 3669 1122059 1122259 1122425 1125811 1125963 1126043 pf4 244 pf4_1:1127614w|pfd1180w pf4_1:1127614w pfd1180w chr4_3.glm_36|24oct01 glm 2 945 1127614 1127685 1127760 1128632 pf4 245 pf4_1:1131406w|pfd1185w pf4_1:1131406w pfd1185w chr4_3.glm_37|24oct01 vbc 2 852 1131406 1131543 1131716 1132429 pf4 246 pf4_1:1133287c|pfd1190c+pfd1195c pf4_1:1133287c pfd1190c+pfd1195c chr4_3.glm_38|24oct01 vbc pseudogene pseudogene 2 1143 1134484c [A] | 1134203 [AA] | 1133709 [T] | 1133648 [TA] 1133287 1134359 1134451 1134520 pf4 247 pf4_1:1138042c|pfd1200c pf4_1:1138042c pfd1200c chr4_3.glm_39|24oct01 vbc 2 618 1138042 1138581 1138725 1138802 pf4 248 pf4_1:1140213w|pfd1205w pf4_1:1140213w pfd1205w chr4_3.glm_40|24oct01 glm 2 693 1140213 1140278 1140386 1141012 pf4 249 pf4_1:1145209w|pfd1210w pf4_1:1145209w pfd1210w chr4_3.glm_41|24oct01 glm 1 510 1145209 1145718 pf4 250 pf4_1:1147614w|pfd1215w pf4_1:1147614w pfd1215w chr4_3.glm_42|24oct01 glm 2 696 1147614 1147751 1147889 1148446 pf4 251 pf4_1:1150294c|pfd1220c pf4_1:1150294c pfd1220c chr4_3.glm_43|24oct01 vbc 2 915 1150294 1151160 1151272 1151319 pf4 252 pf4_1:1152492w|olim pf4_1:1152492w olim pfd1225w chr4_3.glm_44|24oct01 vbc rifin pseudogene rifin pseudogene 2 981 1152501w [TATATATATATAT] | 1152951 [GA] 1152492 1152558 1152897 1153810 pf4 253 pf4_1:1156126c|olim pf4_1:1156126c olim pfd1230c chr4_3.glm_45=chr6_052.glm_9|24oct01 glm rifin rifin 2 975 1156126 1157046 1157202 1157255 pf4 254 pf4_1:1160045w|olim pf4_1:1160045w olim pfd1235w chr4_3.glm_46+47|24oct01 vbc pfemp1 var pfemp1 var 2 10662 1160045 1169485 1170223 1171443 pf4 255 pf4_1:1173602w|olim pf4_1:1173602w olim pfd1240w chr4_3.glm_48|24oct01 glm rifin rifin 2 975 1173602 1173655 1173886 1174806 pf4 256 pf4_1:1176675c|olim pf4_1:1176675c olim pfd1245c chr4_3.glm_49|24oct01 vbc pfemp1 var pfemp1 var 2 6450 1176675 1178057 1178782 1183848 pf4 257 pf4_4281:1570w|glm chrblob_4281.glm_1|24oct01 glm 1 2034 1570 3603 pf4 258 pf4_4281:4229w|glm chrblob_4281.glm_2|24oct01 glm 1 2622 4229 6850 pf4 259 pf4_4281:11258c|glm chrblob_4281.glm_3|24oct01 glm 1 6390 11258 17647