record GenBank ID history name product exons length notes frameshift 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 pf3 1 pf3_1:33641w|chr3_8.pfc0005w=pfc1120c pf3_1:33641w chr3_8.pfc0005w=pfc1120c sanger pfemp1 var pfemp1 var 2 6630 33641 38959 39848 41158 pf3 2 pf3_1:43045c|chr3_8.pfc0010c=pfc1115w pf3_1:43045c chr3_8.pfc0010c=pfc1115w sanger rifin rifin 2 981 43045 43971 44202 44255 pf3 3 pf3_1:46448c|chr3_8.pfc0015c=pfc1110w pf3_1:46448c chr3_8.pfc0015c=pfc1110w vbc var-c pseudogene var-c pseudogene 1 1313 (ry)12 @ 47931 degenerate i n t r o n copy of pfb0020c, pfb0045c, pfb1025w, pfc1110w 47754c [A] | 47603 [GA] | 47163 [TA] 46448 47760 pf3 4 pf3_1:48956c|chr3_8.pfc0025c=pfc1105w pf3_1:48956c chr3_8.pfc0025c=pfc1105w sanger stevor stevor 2 891 48956 49777 49881 49949 pf3 5 pf3_1:52066c|chr3_8.pfc0030c=pfc1100w pf3_1:52066c chr3_8.pfc0030c=pfc1100w sanger stevor stevor 2 1080 52066 53076 53192 53260 pf3 6 pf3_1:54968c|bis pf3_1:54968c bis pfc0030c vbc rifin pseudogene rifin pseudogene 2 437 subtelomeric copy chr 1, 2, 3, 4, 7, 9, 10, 11, 12, 13, 14 copy of pf9_1:36430c 55275c [-TA] 54968 55350 55570 55623 pf3 7 pf3_1:58121w|chr3_8.pfc0035w pf3_1:58121w chr3_8.pfc0035w vbc rifin rifin 2 1107 rifin e n d s with ttg, has longer i n t r o n than stevor 58121 58174 58338 59390 pf3 8 pf3_1:61248w|chr3_8.pfc0040w pf3_1:61248w chr3_8.pfc0040w sanger rifin rifin 2 966 61248 61301 61548 62459 pf3 9 pf3_1:64604w|chr3_8.pfc0045w pf3_1:64604w chr3_8.pfc0045w vbc stevor stevor 2 651 64604 64672 64777 65358 pf3 10 pf3_1:66136c|chr3_8.pfc0050c pf3_1:66136c chr3_8.pfc0050c sanger fatty acid co-a ligase fatty acid co-a ligase 1 2460 66136 68595 pf3 11 pf3_1:73172w|chr3_8.pfc0055w pf3_1:73172w chr3_8.pfc0055w sanger stevor stevor 2 771 73172 73240 73451 74152 pf3 12 pf3_1:74873c|chr3_8.pfc0060c pf3_1:74873c chr3_8.pfc0060c vbc serine/threonine kinase serine/threonine kinase 3 1833 74873 74953 75181 76734 76874 77071 pf3 13 pf3_1:78689c|chr3_8.pfc0065c pf3_1:78689c chr3_8.pfc0065c vbc alpha/beta hydrolase alpha/beta hydrolase 2 1302 78689 79906 80098 80181 pf3 14 pf3_1:81983c|chr3_8.pfc0070c pf3_1:81983c chr3_8.pfc0070c vbc 2 732 81983 82624 82720 82809 pf3 15 pf3_1:84928c|chr3_8.pfc0075c pf3_1:84928c chr3_8.pfc0075c sanger 2 855 84928 85647 85775 85909 pf3 16 pf3_1:87793c|chr3_8.pfc0080c pf3_1:87793c chr3_8.pfc0080c vbc 2 2199 87793 89790 89941 90141 pf3 17 pf3_1:93248c|chr3_8.pfc0085c=pv1h14:25c pf3_1:93248c chr3_8.pfc0085c=pv1h14:25c sanger 2 954 93248 94018 94405 94587 pf3 18 pf3_1:101005w|chr3_8.pfc0090w=pv1h14:30w pf3_1:101005w chr3_8.pfc0090w=pv1h14:30w sanger 2 774 101005 101204 101388 101961 pf3 19 pf3_1:102593c|chr3_8.pfc0095c=pv1h14:35c pf3_1:102593c chr3_8.pfc0095c=pv1h14:35c sanger 1 1197 102593 103789 pf3 20 pf3_1:104641c|chr3_8.pfc0100c=pv1h14:40c pf3_1:104641c chr3_8.pfc0100c=pv1h14:40c sanger 2 1803 104641 104718 104836 106560 pf3 21 pf3_1:110750w|chr3_1.pfc0105w=pv1h14:45w pf3_1:110750w chr3_1.pfc0105w=pv1h14:45w sanger 1 4017 110750 114766 pf3 22 pf3_1:116138w|chr3_1.pfc0110w pf3_1:116138w chr3_1.pfc0110w sanger qimr clag3.1 clag3.1 9 4251 116138 116999 117091 117666 117778 117831 117941 118003 118142 118252 118382 118567 118666 118824 118970 119736 119943 121415 pf3 23 pf3_1:122672c|chr3_1.pfc0115c pf3_1:122672c chr3_1.pfc0115c qimr pseudogene pseudogene 1 4121 126723c [AG] | 126565 [A] | 126225 [A] | 126158 [GA] | 125139 [A] | 124910 [AA] | 124737 [A] | 124694 [ATATATATAT] | 124369 [A] | 124221 [A] | 124049 [TT] | 123825 [ATATATATGTATATATAT] | 123801 [TATATATATGTATGTATATA] |&c 122672 126792 pf3 24 pf3_1:132097w|chr3_1.pfc0120w pf3_1:132097w chr3_1.pfc0120w sanger qimr clag3.2 clag3.2 9 4254 132097 132952 133049 133624 133741 133794 133866 133928 134073 134183 134313 134498 134579 134737 134885 135651 135858 137339 pf3 25 pf3_1:138235w|chr3_1.pfc0125w=pv1h14:50w pf3_1:138235w chr3_1.pfc0125w=pv1h14:50w sanger 1 4098 138235 142332 pf3 26 pf3_1:143051c|chr3_1.pfc0126c=pv1h14:55c pf3_1:143051c chr3_1.pfc0126c=pv1h14:55c sanger 3 459 143051 143338 143449 143550 143667 143735 pf3 27 pf3_1:144725c|chr3_1.pfc0130c=pv1h14:60c pf3_1:144725c chr3_1.pfc0130c=pv1h14:60c sanger 1 1260 144725 145984 pf3 28 pf3_1:148844c|chr3_1.pfc0135c=pv1h14:65c pf3_1:148844c chr3_1.pfc0135c=pv1h14:65c qimr pf3_1:148844c chr3_1.pfc0135c=pv1h14:65c qimr 3 3738 148844 148921 149038 149130 149256 152822 pf3 29 pf3_1:156029c|chr3_1.pfc0140c=pv1h14:70c pf3_1:156029c chr3_1.pfc0140c=pv1h14:70c sanger 1 2352 156029 158380 pf3 30 pf3_1:159454c|chr3_1.pfc0145c=pv1h14:75c pf3_1:159454c chr3_1.pfc0145c=pv1h14:75c sanger 1 4326 159454 163779 pf3 31 pf3_1:166208.1w|chr3_1.pfc0150w=pv1h14:80w|alt pf3_1:166208.1w chr3_1.pfc0150w=pv1h14:80w|alt1 vbc 5 3489 all aa's the same all aa's the same aa's correspond in number 166208 166209 166465 169693 169807 169907 170093 170171 170899 170976 pf3 32 pf3_1:166208.2w|chr3_1.pfc0150w=pv1h14:80w|alt pf3_1:166208.2w chr3_1.pfc0150w=pv1h14:80w|alt2 vbc 1 15 166208 166222 pf3 33 pf3_1:171698c|chr3_1.pfc0155c=pv1h14:85c pf3_1:171698c chr3_1.pfc0155c=pv1h14:85c qimr pf3_1:171698c chr3_1.pfc0155c=pv1h14:85c qimr 2 477 171698 172158 172318 172333 pf3 34 pf3_1:175096w|chr3_2.pfc0160w=pv1h14:90w pf3_1:175096w chr3_2.pfc0160w=pv1h14:90w qimr pf3_1:175096w chr3_2.pfc0160w=pv1h14:90w qimr 8 1851 175096 176403 176495 176568 176711 176751 176892 177007 177112 177239 177374 177454 177574 177637 177765 177803 pf3 35 pf3_1:179407w|chr3_2.pfc0165w=pv1h14:95w pf3_1:179407w chr3_2.pfc0165w=pv1h14:95w qimr pf3_1:179407w chr3_2.pfc0165w=pv1h14:95w qimr 1 6681 179407 186087 pf3 36 pf3_1:186856w|chr3_2.pfc0166w=pv1h14:100w pf3_1:186856w chr3_2.pfc0166w=pv1h14:100w qimr pf3_1:186856w chr3_2.pfc0166w=pv1h14:100w qimr 1 540 186856 187395 pf3 37 pf3_1:187921c|chr3_2.pfc0170c=pv1h14:105c pf3_1:187921c chr3_2.pfc0170c=pv1h14:105c sanger 1 1347 187921 189267 pf3 38 pf3_1:191106w|chr3_2.pfc0175w=pv1h14:110w pf3_1:191106w chr3_2.pfc0175w=pv1h14:110w sanger 1 1782 191106 192887 pf3 39 pf3_1:193246c|chr3_2.pfc0176c=pv1h14:115c pf3_1:193246c chr3_2.pfc0176c=pv1h14:115c qimr pf3_1:193246c chr3_2.pfc0176c=pv1h14:115c qimr 3 594 p.vivax matches in number of condons 193246 193391 193502 193861 194027 194114 pf3 40 pf3_1:195218c|chr3_2.pfc0180c=pv1h14:120c pf3_1:195218c chr3_2.pfc0180c=pv1h14:120c qimr pf3_1:195218c chr3_2.pfc0180c=pv1h14:120c qimr 5 2586 195218 196401 196501 197339 197456 197670 197779 197928 198063 198260 pf3 41 pf3_1:201218w|chr3_2.pfc0185w=pv1h14:125w pf3_1:201218w chr3_2.pfc0185w=pv1h14:125w sanger 1 1578 201218 202795 pf3 42 pf3_1:204018c|chr3_2.pfc0190c=pv1h14:130c pf3_1:204018c chr3_2.pfc0190c=pv1h14:130c sanger 1 1602 204018 205619 pf3 43 pf3_1:208956w|chr3_2.pfc0195w=pv1h14:135w pf3_1:208956w chr3_2.pfc0195w=pv1h14:135w chrblob_3228|24oct01 sanger 1 4291 frameshift near 212211 212211w [A] 208956 213246 pf3 44 pf3_1:214615w|chr3_2.pfc0200w=pv1h14:140w pf3_1:214615w chr3_2.pfc0200w=pv1h14:140w sanger 2 315 214615 214827 215062 215163 pf3 45 pf3_1:215791c|chr3_2.pfc0205c=pv1h14:145c pf3_1:215791c chr3_2.pfc0205c=pv1h14:145c sanger 3 516 215791 215994 216105 216203 216334 216546 pf3 46 pf3_1:217997c|chr3_2.pfc0210c=pv1h14:150c pf3_1:217997c chr3_2.pfc0210c=pv1h14:150c qimr pf3_1:217997c chr3_2.pfc0210c=pv1h14:150c qimr 1 1191 217997 219187 pf3 47 pf3_1:220834c|chr3_2.pfc0215c=pv1h14:155c pf3_1:220834c chr3_2.pfc0215c=pv1h14:155c qimr pf3_1:220834c chr3_2.pfc0215c=pv1h14:155c qimr 3 1419 pv i n t r o n = 87 bases; pf i n t r o n = 88 bases 220834 222134 222262 222318 222407 222467 pf3 48 pf3_1:223731w|chr3_2.pfc0220w=pv1h14:160w pf3_1:223731w chr3_2.pfc0220w=pv1h14:160w sanger 1 4341 223731 228071 pf3 49 pf3_1:228467c|chr3_2.pfc0221c=pv1h14:165c pf3_1:228467c chr3_2.pfc0221c=pv1h14:165c sanger 1 513 228467 228979 pf3 50 pf3_1:230732c|chr3_2.pfc0225c=pv1h14:170c pf3_1:230732c chr3_2.pfc0225c=pv1h14:170c sanger 2 1173 230732 230866 230971 232008 pf3 51 pf3_1:233008c|chr3_2.pfc0230c=pv1h14:175c pf3_1:233008c chr3_2.pfc0230c=pv1h14:175c sanger 1 11937 233008 244944 pf3 52 pf3_1:247917w|chr3_2.pfc0235w=pv1h14:180w pf3_1:247917w chr3_2.pfc0235w=pv1h14:180w sanger 1 3420 247917 251336 pf3 53 pf3_1:251951c|chr3_2.pfc0240c=pv1h14:185c pf3_1:251951c chr3_2.pfc0240c=pv1h14:185c qimr pf3_1:251951c chr3_2.pfc0240c=pv1h14:185c qimr 3 2871 251951 252188 252338 252481 252603 255091 pf3 54 pf3_1:257007w|chr3_2.pfc0241w=pv1h14:190w pf3_1:257007w chr3_2.pfc0241w=pv1h14:190w qimr pf3_1:257007w chr3_2.pfc0241w=pv1h14:190w qimr 3 438 257007 257175 257322 257393 257564 257760 pf3 55 pf3_1:258160c|chr3_2.pfc0245c=pv1h14:195c pf3_1:258160c chr3_2.pfc0245c=pv1h14:195c chrblob_3146.glm_1|24oct01 sanger 1 11802 258160 269961 pf3 56 pf3_1:272539c|chr3_2.pfc0250c=pv1h14:200c pf3_1:272539c chr3_2.pfc0250c=pv1h14:200c sanger 1 1854 272539 274392 pf3 57 pf3_1:275631c|chr3_2.pfc0255c=pv1h14:205c pf3_1:275631c chr3_2.pfc0255c=pv1h14:205c sanger 3 429 275631 275780 275963 276232 276495 276503 pf3 58 pf3_1:278594w|chr3_2.pfc0260w=pv1h14:210w pf3_1:278594w chr3_2.pfc0260w=pv1h14:210w qimr pf3_1:278594w chr3_2.pfc0260w=pv1h14:210w qimr 1 3342 278594 281935 pf3 59 pf3_1:282254c|chr3_2.pfc0261c=pv1h14:215c pf3_1:282254c chr3_2.pfc0261c=pv1h14:215c sanger 1 534 282254 282787 pf3 60 pf3_1:283581c|chr3_2.pfc0262c=pv1h14:220c pf3_1:283581c chr3_2.pfc0262c=pv1h14:220c qimr pf3_1:283581c chr3_2.pfc0262c=pv1h14:220c qimr 1 414 283581 283994 pf3 61 pf3_1:285312c|chr3_2.pfc0265c=pv1h14:225c pf3_1:285312c chr3_2.pfc0265c=pv1h14:225c sanger 2 1887 285312 285398 285623 287422 pf3 62 pf3_1:289618w|chr3_2.pfc0270w pf3_1:289618w chr3_2.pfc0270w vbc 5 1050 289618 289655 289765 289882 289997 290143 290272 290425 290631 291223 pf3 63 pf3_1:291782c|chr3_2.pfc0271c pf3_1:291782c chr3_2.pfc0271c sanger 5 336 291782 291844 292056 292117 292240 292306 292444 292507 292690 292769 pf3 64 pf3_1:295191w|chr3_2.pfc0275w pf3_1:295191w chr3_2.pfc0275w sanger 1 1962 295191 297152 pf3 65 pf3_1:297681c|chr3_2.pfc0280c pf3_1:297681c chr3_2.pfc0280c sanger 1 900 297681 298580 pf3 66 pf3_1:299500w|chr3_2.pfc0281w pf3_1:299500w chr3_2.pfc0281w sanger 1 258 299500 299757 pf3 67 pf3_1:300991w|chr3_2.pfc0282w pf3_1:300991w chr3_2.pfc0282w sanger 4 333 300991 301051 301164 301222 301342 301451 301571 301673 pf3 68 pf3_1:302782c|chr3_2.pfc0285c pf3_1:302782c chr3_2.pfc0285c vbc 2 1602 302782 304380 304656 304658 pf3 69 pf3_1:307326w|chr3_2.pfc0290w pf3_1:307326w chr3_2.pfc0290w sanger 3 438 307326 307335 307539 307717 308231 308479 pf3 70 pf3_1:309367c|chr3_2.pfc0295c pf3_1:309367c chr3_2.pfc0295c sanger 2 426 309367 309711 309936 310016 pf3 71 pf3_1:311650c|chr3_2.pfc0300c pf3_1:311650c chr3_2.pfc0300c sanger 3 774 311650 312291 312537 312662 312905 312910 pf3 72 pf3_1:315479w|chr3_2.pfc0305w pf3_1:315479w chr3_2.pfc0305w sanger 1 1533 315479 317011 pf3 73 pf3_1:317725c|chr3_2.pfc0310c pf3_1:317725c chr3_2.pfc0310c sanger 1 1113 317725 318837 pf3 74 pf3_1:319608c|chr3_2.pfc0315c pf3_1:319608c chr3_2.pfc0315c sanger 5 1170 319608 319686 319880 319934 320081 320142 320308 321248 321479 321511 pf3 75 pf3_1:322597w|chr3_2.pfc0320w pf3_1:322597w chr3_2.pfc0320w sanger 3 2241 322597 322705 322804 322847 322971 325058 pf3 76 pf3_1:325663c|chr3_2.pfc0325c pf3_1:325663c chr3_2.pfc0325c vbc 6 5472 325663 325791 325927 326025 326187 326239 326354 331416 331634 331701 331885 331944 pf3 77 pf3_1:333854w|chr3_3.pfc0330w pf3_1:333854w chr3_3.pfc0330w sanger 1 2100 333854 335953 pf3 78 pf3_1:336703c|chr3_3.pfc0335c pf3_1:336703c chr3_3.pfc0335c sanger 3 11175 336703 343243 343441 347155 347409 348327 pf3 79 pf3_1:350224w|chr3_3.pfc0340w pf3_1:350224w chr3_3.pfc0340w sanger 1 1497 350224 351720 pf3 80 pf3_1:352994w|chr3_3.pfc0345w pf3_1:352994w chr3_3.pfc0345w sanger 1 5136 352994 358129 pf3 81 pf3_1:359017c|chr3_3.pfc0350c pf3_1:359017c chr3_3.pfc0350c sanger 2 1620 359017 360621 360894 360908 pf3 82 pf3_1:362334c|chr3_3.pfc0355c pf3_1:362334c chr3_3.pfc0355c sanger 1 1014 362334 363347 pf3 83 pf3_1:366600w|chr3_3.pfc0360w pf3_1:366600w chr3_3.pfc0360w sanger 3 423 366600 366710 366945 367167 367376 367464 pf3 84 pf3_1:369307w|chr3_3.pfc0365w pf3_1:369307w chr3_3.pfc0365w sanger 1 1599 369307 370905 pf3 85 pf3_1:372481w|chr3_3.pfc0370w pf3_1:372481w chr3_3.pfc0370w sanger 2 1479 372481 373764 373918 374112 pf3 86 pf3_1:374720w|chr3_3.pfc0371w pf3_1:374720w chr3_3.pfc0371w sanger 2 327 374720 374908 375055 375192 pf3 87 pf3_1:375805c|chr3_3.pfc0375c pf3_1:375805c chr3_3.pfc0375c sanger 1 4161 375805 379965 pf3 88 pf3_1:381050w|chr3_3.pfc0380w pf3_1:381050w chr3_3.pfc0380w vbc 6 1728 381050 382360 382601 382719 382839 382914 382998 383093 383254 383331 383507 383554 pf3 89 pf3_1:383894c|chr3_3.pfc0381c pf3_1:383894c chr3_3.pfc0381c vbc 5 537 383894 383958 384130 384213 384409 384541 384754 384833 384974 385148 pf3 90 pf3_1:385812c|chr3_3.pfc0385c pf3_1:385812c chr3_3.pfc0385c sanger 3 4953 repeat pattern 1 1 2 3 1 2 3 1 385812 385889 386015 386098 386489 391279 pf3 91 pf3_1:394323w|chr3_3.pfc0390w pf3_1:394323w chr3_3.pfc0390w sanger 1 2868 394323 397190 pf3 92 pf3_1:399607w|chr3_3.pfc0395w pf3_1:399607w chr3_3.pfc0395w sanger 2 1833 399607 399686 400362 402114 pf3 93 pf3_1:404654w|chr3_3.pfc0400w pf3_1:404654w chr3_3.pfc0400w sanger 1 339 404654 404992 pf3 94 pf3_1:405776c|chr3_3.pfc0405c pf3_1:405776c chr3_3.pfc0405c sanger 1 1827 405776 407602 pf3 95 pf3_1:408763w|chr3_3.pfc0410w pf3_1:408763w chr3_3.pfc0410w sanger 7 843 408763 408817 408944 409071 409164 409240 409389 409478 409632 409716 409915 409991 410106 410436 pf3 96 pf3_1:410908c|chr3_3.pfc0415c pf3_1:410908c chr3_3.pfc0415c sanger 3 5022 410908 415598 415867 416173 416324 416347 pf3 97 pf3_1:417371w|chr3_3.pfc0416w pf3_1:417371w chr3_3.pfc0416w sanger 3 594 417371 417560 417675 417919 418031 418189 pf3 98 pf3_1:419053w|chr3_3.pfc0420w pf3_1:419053w chr3_3.pfc0420w vbc 5 1689 419053 420030 420249 420740 420916 420990 421110 421208 421310 421354 pf3 99 pf3_1:423964w|chr3_3.pfc0425w pf3_1:423964w chr3_3.pfc0425w sanger 1 13653 423964 437616 pf3 100 pf3_1:439394w|chr3_3.pfc0430w pf3_1:439394w chr3_3.pfc0430w sanger 1 3441 439394 442834 pf3 101 pf3_1:444174w|chr3_4.pfc0435w pf3_1:444174w chr3_4.pfc0435w sanger 1 3885 444174 448058 pf3 102 pf3_1:448971c|chr3_4.pfc0440c pf3_1:448971c chr3_4.pfc0440c sanger 1 6810 448971 455780 pf3 103 pf3_1:457849c|chr3_4.pfc0441c pf3_1:457849c chr3_4.pfc0441c sanger 2 708 457849 458477 458623 458701 pf3 104 pf3_1:460618w|chr3_4.pfc0445w pf3_1:460618w chr3_4.pfc0445w vbc 1 333 460618 460950 pf3 105 pf3_1:461338w|chr3_4.pfc0450w pf3_1:461338w chr3_4.pfc0450w sanger 1 330 461338 461667 pf3 106 pf3_1:462761w|chr3_4.pfc0455w pf3_1:462761w chr3_4.pfc0455w sanger 1 2361 462761 465121 pf3 107 pf3_1:466014w|chr3_4.pfc0460w pf3_1:466014w chr3_4.pfc0460w vbc 2 543 466014 466189 466428 466794 pf3 108 pf3_1:467536c|chr3_4.pfc0465c pf3_1:467536c chr3_4.pfc0465c vbc 4 1791 467536 467668 467808 469002 469165 469392 469603 469837 pf3 109 pf3_1:471464w|chr3_4.pfc0470w pf3_1:471464w chr3_4.pfc0470w sanger 2 4104 471464 472376 472572 475762 pf3 110 pf3_1:476798c|chr3_4.pfc0475c pf3_1:476798c chr3_4.pfc0475c sanger 4 2862 476798 478255 478467 478712 478835 478931 479069 480129 pf3 111 pf3_1:485480w|chr3_4.pfc0485w pf3_1:485480w chr3_4.pfc0485w vbc 2 7551 485480 485902 486059 493186 pf3 112 pf3_1:493794c|chr3_4.pfc0486c pf3_1:493794c chr3_4.pfc0486c sanger 1 246 493794 494039 pf3 113 pf3_1:496277w|chr3_4.pfc0490w pf3_1:496277w chr3_4.pfc0490w sanger 5 2109 496277 496579 496742 498138 498305 498408 498525 498763 498963 499028 pf3 114 pf3_1:499373w|chr3_4.pfc0495w pf3_1:499373w chr3_4.pfc0495w sanger 15 1299 499373 499770 499966 500033 500109 500140 500267 500285 500385 500424 500598 500635 500774 500836 500944 501002 501082 501134 501304 501389 501503 501606 501711 501884 502050 502068 502170 502229 502438 502523 pf3 115 pf3_1:503330w|chr3_4.pfc0500w pf3_1:503330w chr3_4.pfc0500w sanger 3 1830 503330 503355 503560 503778 503937 505521 pf3 116 pf3_1:505966c|chr3_4.pfc0505c pf3_1:505966c chr3_4.pfc0505c sanger 1 2307 505966 508272 pf3 117 pf3_1:508628.2w|chr3_4.pfc506w|alt2 pf3_1:508628.2w chr3_4.pfc506w|alt2 vbc 2 36 constitutive e x o n 1 spliced out 508628 508661 508938 508939 pf3 118 pf3_1:508805.1w|chr3_4.pfc0506w|alt1 pf3_1:508805.1w chr3_4.pfc0506w|alt1 vbc 4 411 alternative splicing terminates @ 508958 508805 508808 508938 509079 509216 509352 509499 509626 pf3 119 pf3_1:510427w|chr3_4.pfc0510w pf3_1:510427w chr3_4.pfc0510w vbc 2 2415 510427 510491 510588 512937 pf3 120 pf3_1:513468c|chr3_4.pfc0515c pf3_1:513468c chr3_4.pfc0515c sanger 1 3711 513468 517178 pf3 121 pf3_1:518644w|chr3_4.pfc0520w pf3_1:518644w chr3_4.pfc0520w sanger 1 915 518644 519558 pf3 122 pf3_1:520829c|chr3_4.pfc0525c pf3_1:520829c chr3_4.pfc0525c sanger 7 1323 520829 521066 521222 521268 521392 521481 521597 521685 521797 521886 522011 522760 523096 523114 pf3 123 pf3_1:525713w|chr3_4.pfc0530w pf3_1:525713w chr3_4.pfc0530w sanger 1 1740 525713 527452 pf3 124 pf3_1:527889w|bis pf3_1:527889w bis pfc0530w vbc trna-val-gtg trna-val-gtg 1 73 alignment chr7 1225978..1226052 alignment chr12 2112863..21121937 527889 527961 pf3 125 pf3_1:528576c|ter pf3_1:528576c ter pfc0530c vbc trna-ile-att trna-ile-att 1 74 528576 528649 pf3 126 pf3_1:531365w|chr3_4.pfc0535w pf3_1:531365w chr3_4.pfc0535w vbc 2 342 531365 531454 531664 531915 pf3 127 pf3_1:532720w|chr3_4.pfc0540w pf3_1:532720w chr3_4.pfc0540w sanger 3 774 532720 532722 533034 533641 533789 533951 pf3 128 pf3_1:534298c|chr3_4.pfc0545c pf3_1:534298c chr3_4.pfc0545c chrblob_3482 vbc 2 1029 chrblob_3482 inaccurate first six lines 534298 534356 534512 535481 pf3 129 pf3_1:536420w|chr3_4.pfc0550w pf3_1:536420w chr3_4.pfc0550w sanger 4 2424 536420 537955 538332 538707 538824 539160 539313 539487 pf3 130 pf3_1:539918c|chr3_4.pfc0555c pf3_1:539918c chr3_4.pfc0555c sanger 1 702 539918 540619 pf3 131 pf3_1:540732c|bis pf3_1:540732c bis pfc0555c|03oct02 vbc 5 537 540732 540821 541019 541112 541281 541334 541443 541513 541644 541871 pf3 132 pf3_1:542505c|chr3_4.pfc0560c pf3_1:542505c chr3_4.pfc0560c sanger 1 2355 542505 544859 pf3 133 pf3_1:545395w|chr3_4.pfc0565w pf3_1:545395w chr3_4.pfc0565w sanger 1 2736 545395 548130 pf3 134 pf3_1:548678c|chr3_4.pfc0570c pf3_1:548678c chr3_4.pfc0570c sanger 6 1785 548678 549432 549538 549997 550248 550357 550493 550556 550689 550890 551105 551298 pf3 135 pf3_1:551712c|chr3_4.pfc0571c pf3_1:551712c chr3_4.pfc0571c vbc 17 1581 551712 551797 551881 551915 552120 552175 552361 552460 552579 552717 552856 552897 553061 553175 553287 553326 553436 553517 553628 553865 554038 554105 554203 554286 554411 554476 554592 554714 554835 554895 554971 555032 555178 555361 pf3 136 pf3_1:556011w|chr3_5.pfc0575w pf3_1:556011w chr3_5.pfc0575w vbc 6 1968 556011 556292 556515 556712 556886 556990 557147 557222 557385 558622 558723 558791 pf3 137 pf3_1:559043c|chr3_5.pfc0580c pf3_1:559043c chr3_5.pfc0580c sanger 1 3291 559043 562333 pf3 138 pf3_1:564455w|chr3_5.pfc0581w pf3_1:564455w chr3_5.pfc0581w vbc 5 567 564455 564501 564613 564695 564811 564947 565058 565194 565365 565527 pf3 139 pf3_1:566439c|chr3_5.pfc0582c pf3_1:566439c chr3_5.pfc0582c vbc 6 408 566439 566487 566618 566688 566846 566926 567142 567204 567404 567456 567639 567729 pf3 140 pf3_1:569342c|chr3_5.pfc0585c|17dec98|30oct0 pf3_1:569342c chr3_5.pfc0585c|17dec98|30oct00 vbc 1 4158 569342 573499 pf3 141 pf3_1:573684c|chr3_5.pfc0590c|17dec98 pf3_1:573684c chr3_5.pfc0590c|17dec98 vbc 1 1359 573684 575042 pf3 142 pf3_1:576215c|chr3_5.pfc0595c pf3_1:576215c chr3_5.pfc0595c sanger 1 927 576215 577141 pf3 143 pf3_1:580875w|chr3_5.pfc0600w pf3_1:580875w chr3_5.pfc0600w vbc 2 777 580875 580931 581125 581844 pf3 144 pf3_1:583234w|chr3_5.pfc0605w pf3_1:583234w chr3_5.pfc0605w sanger 1 744 583234 583977 pf3 145 pf3_1:585679c|chr3_5.pfc0610c pf3_1:585679c chr3_5.pfc0610c sanger 1 3546 585679 589224 pf3 146 pf3_1:601273.2w|chr3_5.pfc0615w+pfc0620w|alt2 pf3_1:601273.2w chr3_5.pfc0615w+pfc0620w|alt2 vbc 2 3120 read through taa @ 602266 601273 602355 602570 604606 pf3 147 pf3_1:601273.1w|chr3_5.pfc0615w|alt1 pf3_1:601273.1w chr3_5.pfc0615w|alt1 vbc 1 996 pfc0615w and pfc0620w dicistronic 601273 602268 pf3 148 pf3_1:602435.1w|chr3_5.pfc0620w|alt1 pf3_1:602435.1w chr3_5.pfc0620w|alt1 vbc 2 2040 pfc0615w and pfc0620 dicistronic 602435 602437 602570 604606 pf3 149 pf3_1:605558w|chr3_5.pfc0625w pf3_1:605558w chr3_5.pfc0625w sanger 1 1836 605558 607393 pf3 150 pf3_1:608009w|chr3_5.pfc0630w pf3_1:608009w chr3_5.pfc0630w sanger 2 570 608009 608078 608190 608689 pf3 151 pf3_1:609414c|chr3_5.pfc0635c pf3_1:609414c chr3_5.pfc0635c sanger 1 684 609414 610097 pf3 152 pf3_1:613146w|chr3_5.pfc0640w pf3_1:613146w chr3_5.pfc0640w sanger 1 6345 613146 619490 pf3 153 pf3_1:620120w|chr3_5.pfc0645w+pfc650w pf3_1:620120w chr3_5.pfc0645w+pfc650w vbc 11 5148 620120 620332 620432 620499 620579 620633 620776 620828 620925 621000 621125 621518 621618 621808 621898 621943 622442 622558 622740 625831 626010 626852 pf3 154 pf3_1:627285c|chr3_5.pfc0670c pf3_1:627285c chr3_5.pfc0670c sanger 1 771 627285 628055 pf3 155 pf3_1:629520c|chr3_5.pfc0675c pf3_1:629520c chr3_5.pfc0675c vbc 1 684 629520 630203 pf3 156 pf3_1:632260w|chr3_5.pfc0680w pf3_1:632260w chr3_5.pfc0680w vbc 3 1458 632260 632734 633047 633223 633331 634136 pf3 157 pf3_1:634957w|chr3_5.pfc0685w|04may00 pf3_1:634957w chr3_5.pfc0685w|04may00 sanger 1 2742 634957 637698 pf3 158 pf3_1:638156c|chr3_5.pfc0690c pf3_1:638156c chr3_5.pfc0690c sanger 1 1098 638156 639253 pf3 159 pf3_1:640860w|chr3_5.pfc0695w pf3_1:640860w chr3_5.pfc0695w vbc 2 834 640860 641177 641427 641942 pf3 160 pf3_1:642595c|chr3_6.pfc0700c pf3_1:642595c chr3_6.pfc0700c sanger 1 924 642595 643518 pf3 161 pf3_1:645309w|chr3_6.pfc0701w pf3_1:645309w chr3_6.pfc0701w sanger 1 897 645309 646205 pf3 162 pf3_1:646523c|chr3_6.pfc0705c pf3_1:646523c chr3_6.pfc0705c sanger 2 7272 646523 649647 649775 653921 pf3 163 pf3_1:656694w|chr3_6.pfc0710w pf3_1:656694w chr3_6.pfc0710w sanger 3 1143 656694 657356 657596 657658 657901 658317 pf3 164 pf3_1:658800c|chr3_6.pfc0715c pf3_1:658800c chr3_6.pfc0715c chrblob_2927.gen_1sanger pf3_1:658800c chr3_6.pfc0715c chrblob_2927.gen_1sanger 1 3027 658800 661826 pf3 165 pf3_1:663680w|chr3_6.pfc0720w pf3_1:663680w chr3_6.pfc0720w sanger 1 1386 663680 665065 pf3 166 pf3_1:666155c|chr3_6.pfc0725c pf3_1:666155c chr3_6.pfc0725c vbc 3 909 666155 666265 666485 667089 667355 667547 pf3 167 pf3_1:671131w|chr3_6.pfc0730w pf3_1:671131w chr3_6.pfc0730w vbc 3 600 671131 671434 671903 672018 672130 672309 pf3 168 pf3_1:674515w|chr3_6.pfc0735w pf3_1:674515w chr3_6.pfc0735w sanger 2 393 674515 674747 674988 675147 pf3 169 pf3_1:675907c|chr3_6.pfc0740c pf3_1:675907c chr3_6.pfc0740c sanger 2 1803 675907 677493 677735 677950 pf3 170 pf3_1:679468c|chr3_6.pfc0745c+chrblob_3140.g pf3_1:679468c chr3_6.pfc0745c+chrblob_3140.glm_1sanger pf3_1:679468c chr3_6.pfc0745c+chrblob_3140.glm_1sanger 2 759 679468 679781 679914 680358 pf3 171 pf3_1:682955w|chr3_6.pfc0750w pf3_1:682955w chr3_6.pfc0750w vbc 2 2910 682955 684106 684398 686155 pf3 172 pf3_1:686827.1c|chr3_6.pfc0755c|alt1 pf3_1:686827.1c chr3_6.pfc0755c|alt1 vbc 2 4746 may initatiate @ 691527 686827 691527 691940 691984 pf3 173 pf3_1:691485.2c|chr3_6.pfc0755c|alt2 pf3_1:691535.2c chr3_6.pfc0755c|alt2 vbc 2 117 terminates prematurely 691485 691556 691940 691984 pf3 174 pf3_1:696215c|chr3_6.pfc0760c pf3_1:696215c chr3_6.pfc0760c sanger 1 10185 696215 706399 pf3 175 pf3_1:708925c|chr3_6.pfc0765c pf3_1:708925c chr3_6.pfc0765c sanger 2 1557 708925 709163 709437 710754 pf3 176 pf3_1:713195c|chr3_6.pfc0770c pf3_1:713195c chr3_6.pfc0770c sanger 2 4860 713195 717793 718243 718503 pf3 177 pf3_1:721686w|chr3_6.pfc0775w pf3_1:721686w chr3_6.pfc0775w sanger 3 486 721686 721709 722158 722528 722711 722801 pf3 178 pf3_1:724930w|chr3_6.pfc0780w pf3_1:724930w chr3_6.pfc0780w sanger 10 8613 724930 732705 732890 732961 733038 733114 733260 733326 733484 733530 733714 733785 733907 733949 734048 734121 734238 734540 734666 734747 pf3 179 pf3_1:734876c|chr3_6.pfc0785c pf3_1:734876c chr3_6.pfc0785c vbc 1 681 734876 735556 pf3 180 pf3_1:736099w|chr3_6.pfc0790w pf3_1:736099w chr3_6.pfc0790w vbc 2 2070 736099 736161 736398 738404 pf3 181 pf3_1:738862w|chr3_6.pfc0795w pf3_1:738862w chr3_6.pfc0795w sanger 1 609 738862 739470 pf3 182 pf3_1:740600w|chr3_6.pfc0800w pf3_1:740600w chr3_6.pfc0800w sanger 1 1125 740600 741724 pf3 183 pf3_1:745136w|chr3_6.pfc0805w pf3_1:745136w chr3_6.pfc0805w sanger 1 7374 745136 752509 pf3 184 pf3_1:753162c|chr3_6.pfc0810c pf3_1:753162c chr3_6.pfc0810c sanger 3 3360 753162 756005 756335 756759 756873 756963 pf3 185 pf3_1:758364c|chr3_6.pfc0815c pf3_1:758364c chr3_6.pfc0815c vbc 17 1782 758364 758493 758596 758666 758766 758832 758933 759014 759223 759292 759371 759517 759642 759713 759821 759894 759972 760077 760196 760275 760400 760457 760630 760680 760777 760840 761014 761056 761187 761285 761423 761633 761754 762110 pf3 186 pf3_1:764486w|chr3_6.pfc0820w pf3_1:764486w chr3_6.pfc0820w chrblob_3180.glm_1|24oct01 sanger 1 14946 764486 779431 pf3 187 pf3_1:779783c|chr3_6.pfc0825c pf3_1:779783c chr3_6.pfc0825c sanger 1 3054 779783 782836 pf3 188 pf3_1:785124w|chr3_6.pfc0830w pf3_1:785124w chr3_6.pfc0830w sanger 1 360 785124 785483 pf3 189 pf3_1:786529w|chr3_6.pfc0831w pf3_1:786529w chr3_6.pfc0831w vbc 4 1074 786529 787290 787399 787519 787687 787781 787884 787979 pf3 190 pf3_1:788511c|chr3_6.pfc0835c pf3_1:788511c chr3_6.pfc0835c sanger 3 1323 788511 789670 789796 789882 790077 790152 pf3 191 pf3_1:792248w|chr3_6.pfc0840w pf3_1:792248w chr3_6.pfc0840w chrblob_0030.gen_2|24oct01 sanger 1 5595 792248 797842 pf3 192 pf3_1:798931c|chr3_6.pfc0845c pf3_1:798931c chr3_6.pfc0845c chrblob_0076.glm_1|24oct01 sanger 1 324 798931 799254 pf3 193 pf3_1:800263c|chr3_6.pfc0850c pf3_1:800263c chr3_6.pfc0850c chrblob_0076.glm0.1|24oct01 vbc 2 2790 800263 802983 803138 803206 pf3 194 pf3_1:803948w|chr3_6.pfc0855w pf3_1:803948w chr3_6.pfc0855w sanger 2 483 803948 804373 804474 804530 pf3 195 pf3_1:807240w|chr3_7.pfc0860w pf3_1:807240w chr3_7.pfc0860w sanger 1 3603 807240 810842 pf3 196 pf3_1:812239w|chr3_7.pfc0865w pf3_1:812239w chr3_7.pfc0865w sanger 4 930 812239 812359 812471 812569 812705 812859 812971 813525 pf3 197 pf3_1:814583w|chr3_7.pfc0870w pf3_1:814583w chr3_7.pfc0870w sanger 3 471 814583 814710 814866 815016 815174 815365 pf3 198 pf3_1:817378w|chr3_7.pfc0875w pf3_1:817378w chr3_7.pfc0875w vbc 4 9393 817378 817510 817826 817928 818155 827198 827360 827472 pf3 199 pf3_1:827746c|chr3_7.pfc0880c pf3_1:827746c chr3_7.pfc0880c sanger 1 1434 827746 829179 pf3 200 pf3_1:830503c|chr3_7.pfc0885c pf3_1:830503c chr3_7.pfc0885c sanger 1 945 830503 831447 pf3 201 pf3_1:833977w|chr3_7.pfc0886w pf3_1:833977w chr3_7.pfc0886w vbc 6 468 833977 834005 834194 834302 834429 834491 834614 834750 834845 834915 835045 835103 pf3 202 pf3_1:837032w|chr3_7.pfc0890w pf3_1:837032w chr3_7.pfc0890w vbc 5 564 837032 837198 837385 837491 837687 837773 837876 838022 838152 838207 pf3 203 pf3_1:839209w|chr3_7.pfc0895w pf3_1:839209w chr3_7.pfc0895w vbc 1 1752 839209 840960 pf3 204 pf3_1:842383w|chr3_7.pfc0900w pf3_1:842383w chr3_7.pfc0900w sanger 1 1608 842383 843990 pf3 205 pf3_1:844917c|chr3_7.pfc0905c pf3_1:844917c chr3_7.pfc0905c chrblob_0049.glm_1|24oct01 sanger 1 9258 844917 854174 pf3 206 pf3_1:857483w|chr3_7.pfc0910w pf3_1:857483w chr3_7.pfc0910w sanger 1 1290 857483 858772 pf3 207 pf3_1:859411c|chr3_7.pfc0911c pf3_1:859411c chr3_7.pfc0911c sanger 5 399 859411 859521 859735 859803 860061 860094 860197 860309 860431 860502 pf3 208 pf3_1:861684w|chr3_7.pfc0912w pf3_1:861684w chr3_7.pfc0912w sanger 8 540 861684 861720 861845 861909 862073 862154 862289 862350 862442 862528 862633 862690 862823 862889 863009 863090 pf3 209 pf3_1:867487w|chr3_7.pfc0915w pf3_1:867487w chr3_7.pfc0915w sanger 2 1302 867487 867877 868102 869012 pf3 210 pf3_1:871883w|chr3_7.pfc0920w pf3_1:871883w chr3_7.pfc0920w sanger 3 477 871883 871976 872372 872623 872835 872965 pf3 211 pf3_1:874405w|chr3_7.pfc0925w pf3_1:874405w chr3_7.pfc0925w sanger 2 1479 874405 875670 875969 876181 pf3 212 pf3_1:876629c|chr3_7.pfc0930c pf3_1:876629c chr3_7.pfc0930c sanger 1 5535 876629 882163 pf3 213 pf3_1:883632c|chr3_7.pfc0935c pf3_1:883632c chr3_7.pfc0935c sanger 7 1194 883632 884111 884262 884329 884449 884613 884741 884801 884888 884938 885073 885203 885409 885646 pf3 214 pf3_1:886684c|chr3_7.pfc0940c pf3_1:886684c chr3_7.pfc0940c sanger 1 2421 886684 889104 pf3 215 pf3_1:891430w|chr3_7.pfc0945w pf3_1:891430w chr3_7.pfc0945w sanger 5 987 891430 891734 891824 892362 892458 892506 892605 892631 892715 892781 pf3 216 pf3_1:893215c|chr3_7.pfc0950c pf3_1:893215c chr3_7.pfc0950c sanger 1 3225 893215 896439 pf3 217 pf3_1:897526w|chr3_7.pfc0955w pf3_1:897526w chr3_7.pfc0955w sanger 2 2208 897526 899380 899686 900038 pf3 218 pf3_1:900433c|chr3_7.pfc0960c pf3_1:900433c chr3_7.pfc0960c sanger 5 5841 900433 900627 900769 900868 900949 901037 901188 901394 901538 906787 pf3 219 pf3_1:909587w|chr3_7.pfc0965w pf3_1:909587w chr3_7.pfc0965w sanger 1 8121 909587 917707 pf3 220 pf3_1:919645w|chr3_7.pfc0970w pf3_1:919645w chr3_7.pfc0970w vbc 9 3762 919645 919893 920112 922970 923065 923237 923344 923380 923530 923631 923828 923943 924095 924151 924308 924380 924518 924613 pf3 221 pf3_1:925315c|chr3_7.pfc0975c pf3_1:925315c chr3_7.pfc0975c sanger 1 516 925315 925830 pf3 222 pf3_1:927311c|chr3_7.pfc0980c pf3_1:927311c chr3_7.pfc0980c sanger 2 1854 927311 929108 929395 929450 pf3 223 pf3_1:929859c|chr3_7.pfc0990c pf3_1:929859c chr3_7.pfc0990c sanger 14 2262 929859 929992 930123 930180 930279 930333 930437 930471 930608 930654 930769 930920 931075 931137 931284 931348 931446 931527 931634 931719 931864 931953 932073 932114 932190 933496 933632 933677 pf3 224 pf3_1:934883c|chr3_7.pfc0995c pf3_1:934883c chr3_7.pfc0995c sanger 1 1962 934883 936844 pf3 225 pf3_1:939216w|chr3_7.pf1000w pf3_1:939216w chr3_7.pf1000w vbc 2 2556 939216 941690 941893 941973 pf3 226 pf3_1:942209c|chr3_7.pfc1005c pf3_1:942209c chr3_7.pfc1005c sanger 1 1215 942209 943423 pf3 227 pf3_1:945046w|chr3_7.pfc1010w pf3_1:945046w chr3_7.pfc1010w vbc 2 4044 945046 947098 947375 949365 pf3 228 pf3_1:949636c|chr3_7.pfc1011c pf3_1:949636c chr3_7.pfc1011c sanger 2 2190 dicistronic with chr3_7.pfc1015c 949636 949762 949876 951938 pf3 229 pf3_1:952017c|chr3_7.pfc1015c pf3_1:952017c chr3_7.pfc1015c sanger 1 7023 dicistronic with chr3_7.pfc1011c 952017 959039 pf3 230 pf3_1:960773w|chr3_7.pfc1016w pf3_1:960773w chr3_7.pfc1016w vbc 5 570 960773 960872 961038 961250 961457 961587 961673 961736 961814 961875 pf3 231 pf3_1:962225c|chr3_7.pfc1020c pf3_1:962225c chr3_7.pfc1020c sanger 2 789 962225 962850 963012 963174 pf3 232 pf3_1:965347c|chr3_7.pfc1025c pf3_1:965347c chr3_7.pfc1025c sanger 3 165 965347 965395 965577 965674 965857 965874 pf3 233 pf3_1:967838w|chr3_7.pfc1030w pf3_1:967838w chr3_7.pfc1030w sanger 1 4629 967838 972466 pf3 234 pf3_1:973540w|chr3_7.pfc1035w pf3_1:973540w chr3_7.pfc1035w sanger 1 1326 973540 974865 pf3 235 pf3_1:975640w|chr3_7.pfc1040w pf3_1:975640w chr3_7.pfc1040w sanger 1 1302 975640 976941 pf3 236 pf3_1:977026c|chr3_7.pfc1045c pf3_1:977026c chr3_7.pfc1045c vbc 3 3399 977026 977116 977202 977262 977390 980636 pf3 237 pf3_1:982935w|chr3_7.pfc1050w pf3_1:982935w chr3_7.pfc1050w sanger 4 948 982935 982970 983117 983285 983427 983736 983848 984280 pf3 238 pf3_1:985301w|chr3_7.pfc1055w pf3_1:985301w chr3_7.pfc1055w vbc 3 2013 985301 986957 987070 987296 987424 987552 pf3 239 pf3_1:988214c|chr3_7.pfc1060c pf3_1:988214c chr3_7.pfc1060c sanger 1 2082 988214 990295 pf3 240 pf3_1:995319w|chr3_7.pfc1065w pf3_1:995319w chr3_7.pfc1065w vbc 1 2934 read through taa @ 995556 995319 998252 pf3 241 pf3_1:999542c|chr3_7.pfc1070c pf3_1:999542c chr3_7.pfc1070c sanger pseudogene var-c fragment pseudogene var-c fragment 1 1436 aligns with pf2:873767c pfb0975c pseudogene var-c fragment central region aligns with c10:60022w pf10_0011+0012w var-c pseudogene c10:6022w pf10_0011+0012w aligns with pfa0755w var-c pseudogene at front 1000884c [T] | 1000493 [A] | 1000183 [AA] | 1000133 [AT] | 1000059 [GT] 999542 1000977 pf3 242 pf3_1:1002066w|chr3_7.pfc1075w pf3_1:1002066w chr3_7.pfc1075w vbc pfb0980 rifin pseudogene pfb0980 rifin pseudogene 2 1249 chimera chr1, model chr2, cf chr3, chr6, chr7, chr10, chr11 "pfb0980" 1002081w [TTAT] | 1002328 [AA] | 1002495 [AG] | 1002506 [GT] 1002066 1002123 1002280 1003470 pf3 243 pf3_1:1004083c|chr3_7.pfc1080c pf3_1:1004083c chr3_7.pfc1080c sanger stevor stevor 2 696 1004083 1004709 1004804 1004872 pf3 244 pf3_1:1007012c|chr3_7.pfc1085c pf3_1:1007012c chr3_7.pfc1085c sanger stevor stevor 2 693 1007012 1007635 1007742 1007810 pf3 245 pf3_1:1009025w|chr3_7.pfc1090w pf3_1:1009025w chr3_7.pfc1090w sanger stevor stevor 2 930 1009025 1009093 1009274 1010134 pf3 246 pf3_1:1012465w|chr3_7.pfc1095w pf3_1:1012465w chr3_7.pfc1095w sanger stevor stevor 2 1050 24 aa's, ttg @ codon 18, gta aaa aac e x o n 2 as rifin small e x o n as stevor 1012465 1012536 1012635 1013612 pf3 247 pf3_1:1015544.1w|chr3_7.pfc1100w=pfc0030c|alt1 pf3_1:1015544.1w chr3_7.pfc1100w=pfc0030c|alt1 vbc rifin rifin 2 939 1015544 1015597 1015759 1016643 pf3 248 pf3_1:1015544.2w|chr3_7.pfc1100w=pfc0030c|alt2 pf3_1:1015544.2w chr3_7.pfc1100w=pfc0030c|alt2 sanger stevor stevor 2 954 1015544 1015612 1015759 1016643 pf3 249 pf3_1:1018668w|chr3_7.pfc1105w=pfc0025c pf3_1:1018668w chr3_7.pfc1105w=pfc0025c sanger stevor stevor 2 906 1018668 1018736 1018842 1019678 pf3 250 pf3_1:1020870w|chr3_7.pfc1110w=pfc0015c pf3_1:1020870w chr3_7.pfc1110w=pfc0015c vbc var-c = pfemp1 e x o n 2 note pseudogene family var-c = pfemp1 e x o n 2 note pseudogene family 1 1212 t pf3_1:1020870w chr3_7.pfc1110w=pfc0015c vbc var-c = pfemp1 e x o n 2 note pseudogene family (ry)12 at 1020768 degenerate i n t r o n unframeshifted model, c1:602412w copy of pfb0020c, pfb0045c, pfb1025w, pfc0015c 1020876w [A] | 1021027 [GAt] | 1021329 [A] | 1021483 [GA] 1020870 1022081 pf3 251 pf3_1:1024241w|chr3_7.pfc1115w=pfc0010c pf3_1:1024241w chr3_7.pfc1115w=pfc0010c sanger stevor stevor 2 1116 1024241 1024309 1024553 1025599 pf3 252 pf3_1:1027492c|chr3_7.pfc1120c pf3_1:1027492c chr3_7.pfc1120c sanger pfemp1 var pfemp1 var 2 6510 chr13_pf6.1 c-dna aligns with pfemp1 var e x o n 2 1027492 1028775 1029699 1034924